RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 AIM2O14862 343 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 MUSKO15146 869 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 CES1P23141 567 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 HOXD9P28356 352 aaPredicted RBP13.72□□□□□ -0.21
THBS3-202ENST00000428962 CDKN2DP55273 166 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 DSG1Q02413 1049 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 PEX6Q13608 980 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 CCNIQ14094 377 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 HECTD3Q5T447 861 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 PRSS55Q6UWB4 352 aaPredicted RBP13.72□□□□□ -0.21
THBS3-202ENST00000428962 CUZD1Q86UP6 607 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 PGAM4Q8N0Y7 254 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 SLC26A7Q8TE54 656 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 L3HYPDHQ96EM0 354 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 MYEOVQ96EZ4 313 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 DNAJC1Q96KC8 554 aaKnown RBP13.72□□□□□ -0.21
THBS3-202ENST00000428962 TBATAQ96M53 351 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 ASB2Q96Q27 587 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 PSKH2Q96QS6 385 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 CYP4F12Q9HCS2 524 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 INTS10Q9NVR2 710 aaKnown RBP13.72□□□□□ -0.21
THBS3-202ENST00000428962 PPM1HQ9ULR3 514 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 ARIH1Q9Y4X5 557 aaPredicted RBP13.72□□□□□ -0.21
THBS3-202ENST00000428962 BACE2Q9Y5Z0 518 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 ARL5AQ9Y689 179 aa13.72□□□□□ -0.21
THBS3-202ENST00000428962 ZFP37Q9Y6Q3 630 aaPredicted RBP13.72□□□□□ -0.21
THBS3-202ENST00000428962 NEMP2A6NFY4 417 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 KDELR3O43731 214 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 RHOCP08134 193 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 IMPDH1P20839 514 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 SP100P23497 879 aaPredicted RBP13.71□□□□□ -0.21
THBS3-202ENST00000428962 PMLP29590 882 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 SLC6A4P31645 630 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 ABL2P42684 1182 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 SUOXP51687 545 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 GALNT3Q14435 633 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 GPNMBQ14956 572 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 USP41Q3LFD5 358 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 ANO7Q6IWH7 933 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 CHST9Q7L1S5 443 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 RAB44Q7Z6P3 723 aaPredicted RBP13.71□□□□□ -0.21
THBS3-202ENST00000428962 HPS6Q86YV9 775 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 DSELQ8IZU8 1212 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 CFAP52Q8N1V2 620 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 OR4L1Q8NH43 312 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 ANKRD49Q8WVL7 239 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 TRIB3Q96RU7 358 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.21
THBS3-202ENST00000428962 ALG9Q9H6U8 611 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 EFCAB1Q9HAE3 211 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 MEAF6Q9HAF1 191 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 STK39Q9UEW8 545 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 G3BP2Q9UN86 482 aaKnown RBP13.71□□□□□ -0.21
THBS3-202ENST00000428962 KCTD3Q9Y597 815 aa13.71□□□□□ -0.21
THBS3-202ENST00000428962 COPG1Q9Y678 874 aaKnown RBP13.71□□□□□ -0.21
THBS3-202ENST00000428962 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.71□□□□□ -0.22
THBS3-202ENST00000428962 A0A0D9SEW6 157 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 ILVBLA1L0T0 632 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 CCDC162PA2VCL2 907 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 OR51F1A6NGY5 319 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 TMEM233B4DJY2 109 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 CCL22O00626 93 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 SMNDC1O75940 238 aaKnown RBP eCLIP13.71□□□□□ -0.22
THBS3-202ENST00000428962 JUNP05412 331 aaKnown RBP13.71□□□□□ -0.22
THBS3-202ENST00000428962 HNRNPLP14866 589 aaKnown RBP eCLIP13.71□□□□□ -0.22
THBS3-202ENST00000428962 STC1P52823 247 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 INHBCP55103 352 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 ZNF177Q13360 481 aaPredicted RBP13.71□□□□□ -0.22
THBS3-202ENST00000428962 ART3Q13508 389 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 SQLEQ14534 574 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 GSTA3Q16772 222 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 TYSND1Q2T9J0 566 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 PPM1LQ5SGD2 360 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 GPR158Q5T848 1215 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 AFTPHQ6ULP2 937 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 TAS1R1Q7RTX1 841 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 LDB1Q86U70 411 aaPredicted RBP13.71□□□□□ -0.22
THBS3-202ENST00000428962 APLFQ8IW19 511 aaPredicted RBP13.71□□□□□ -0.22
THBS3-202ENST00000428962 CRIPAKQ8N1N5 446 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 PELI3Q8N2H9 469 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 OR7D4Q8NG98 312 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 MICAL1Q8TDZ2 1067 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 FAM136AQ96C01 138 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 ARMC5Q96C12 935 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 RCN3Q96D15 328 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 SPON2Q9BUD6 331 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 VCXQ9H320 206 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 NLE1Q9NVX2 485 aaPredicted RBP13.71□□□□□ -0.22
THBS3-202ENST00000428962 HSFX1Q9UBD0 423 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 CRYL1Q9Y2S2 319 aa13.71□□□□□ -0.22
THBS3-202ENST00000428962 CHD5Q8TDI0 1954 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 A0A1B0GVM2 712 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 ZNF840PA6NDX5 716 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 TCAF2A6NFQ2 919 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 INSIG1O15503 277 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 SKAP2O75563 359 aaPredicted RBP13.7□□□□□ -0.22
THBS3-202ENST00000428962 SLC4A1P02730 911 aa13.7□□□□□ -0.22
THBS3-202ENST00000428962 PDHA1P08559 390 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms