RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PPANQ9NQ55 473 aaKnown RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 C20orf96Q9NUD7 363 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 HAUS2Q9NVX0 235 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 VPS18Q9P253 973 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 MARCH4Q9P2E8 410 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 PSMC3IPQ9P2W1 217 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 IL36AQ9UHA7 158 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 ARIH1Q9Y4X5 557 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 PIAS3Q9Y6X2 628 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 EDDM13A0A1B0GTR0 161 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 TSPAN11A1L157 253 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 CCDC162PA2VCL2 907 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 CAPN8A6NHC0 703 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 GOLGA8CPA6NN73 597 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 LOC730098B7Z3J9 87 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 AP3B1O00203 1094 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 RGS16O15492 202 aaPredicted RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 SPINT1O43278 529 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 CDH16O75309 829 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 CLDN7O95471 211 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 IVLP07476 585 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 C1SP09871 688 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 CD72P21854 359 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 GABRB3P28472 473 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 NNMTP40261 264 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 MSH2P43246 934 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 KIR2DL1P43626 348 aaPredicted RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 MAPK8P45983 427 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 GRIA4P48058 902 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 EPHB1P54762 984 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 MAGOHP61326 146 aaKnown RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 ST8SIA6P61647 398 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 ACVR1Q04771 509 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 FRG1Q14331 258 aaKnown RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 TAF1AQ15573 450 aaPredicted RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 C2orf27AQ580R0 203 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 SERPINA13PQ6UXR4 307 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 PACS1Q6VY07 963 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 PARS2Q7L3T8 475 aaKnown RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 EXOC3L1Q86VI1 746 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 CCNJLQ8IV13 435 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 PLPP6Q8IY26 295 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 ZNF513Q8N8E2 541 aaPredicted RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 BRSK1Q8TDC3 778 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 PTCD2Q8WV60 388 aaKnown RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 HDAC10Q969S8 669 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 PGM2Q96G03 612 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 ATXN7L3BQ96GX2 97 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 TUBGCP5Q96RT8 1024 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 FAM129BQ96TA1 746 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 KLF6Q99612 283 aaPredicted RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 ADGRE3Q9BY15 652 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 MED4Q9NPJ6 270 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 PRSS16Q9NQE7 514 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 NLE1Q9NVX2 485 aaPredicted RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 B4GALT6Q9UBX8 382 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 SLC24A2Q9UI40 661 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 FKBPLQ9UIM3 349 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 PLA2G4CQ9UP65 541 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 ITM2BQ9Y287 266 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 FNDC3AQ9Y2H6 1198 aaKnown RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 MTF2Q9Y483 593 aaPredicted RBP8.9□□□□□ -0.98
SMC6-204ENST00000428868 STON1Q9Y6Q2 735 aa8.9□□□□□ -0.98
SMC6-204ENST00000428868 LRP4O75096 1905 aa8.9□□□□□ -0.99
SMC6-204ENST00000428868 PLXND1Q9Y4D7 1925 aa8.9□□□□□ -0.99
SMC6-204ENST00000428868 C1orf232A0A0U1RR37 186 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 MAGEB16A2A368 324 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 TRIM49D1C9J1S8 452 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 GAPDHSO14556 408 aaPredicted RBP8.89□□□□□ -0.99
SMC6-204ENST00000428868 POLR3GO15318 223 aaPredicted RBP8.89□□□□□ -0.99
SMC6-204ENST00000428868 ADAM23O75077 832 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 RPP40O75818 363 aaKnown RBP8.89□□□□□ -0.99
SMC6-204ENST00000428868 PAPSS2O95340 614 aaPredicted RBP8.89□□□□□ -0.99
SMC6-204ENST00000428868 GOT2P00505 430 aaKnown RBP8.89□□□□□ -0.99
SMC6-204ENST00000428868 EPHX1P07099 455 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 HNRNPLP14866 589 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMC6-204ENST00000428868 TIMP2P16035 220 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 CA4P22748 312 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 SLC1A2P43004 574 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 RECQLP46063 649 aaPredicted RBP8.89□□□□□ -0.99
SMC6-204ENST00000428868 PSMD8P48556 350 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 CDKN1CP49918 316 aaPredicted RBP8.89□□□□□ -0.99
SMC6-204ENST00000428868 RALGDSQ12967 914 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 CTBP1Q13363 440 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 PEX6Q13608 980 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 ENPP2Q13822 863 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 HSP90B2PQ58FF3 399 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 TMEM196Q5HYL7 178 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 PDPK2PQ6A1A2 396 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 KIAA1211LQ6NV74 962 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 CRTC1Q6UUV9 634 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 CYS1Q717R9 158 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 PTAR1Q7Z6K3 402 aaPredicted RBP8.89□□□□□ -0.99
SMC6-204ENST00000428868 TRABD2AQ86V40 505 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 SLC26A11Q86WA9 606 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 LRRC6Q86X45 466 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 KRT222Q8N1A0 295 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 C4orf33Q8N1A6 199 aa8.89□□□□□ -0.99
SMC6-204ENST00000428868 PLCD3Q8N3E9 789 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms