RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PLA2G5P39877 138 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 CHRNA4P43681 627 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 GRIA4P48058 902 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 VPS41P49754 854 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 RPL26P61254 145 aaKnown RBP14.6□□□□□ -0.07
SGCE-204ENST00000428696 RACK1P63244 317 aaKnown RBP14.6□□□□□ -0.07
SGCE-204ENST00000428696 MPP3Q13368 585 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 OLIG2Q13516 323 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 FGL2Q14314 439 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 AASDHQ4L235 1098 aaPredicted RBP14.6□□□□□ -0.07
SGCE-204ENST00000428696 TMEM259Q4ZIN3 620 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 NAPEPLDQ6IQ20 393 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 CRTC1Q6UUV9 634 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 LIPIQ6XZB0 460 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 RABEPKQ7Z6M1 372 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 ATL2Q8NHH9 583 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 SKA1Q96BD8 255 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 C1QTNF2Q9BXJ5 285 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 GPR63Q9BZJ6 419 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 PARD6AQ9NPB6 346 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 RAB6BQ9NRW1 208 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.6□□□□□ -0.07
SGCE-204ENST00000428696 TPX2Q9ULW0 747 aaKnown RBP14.6□□□□□ -0.07
SGCE-204ENST00000428696 SLC6A14Q9UN76 642 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 RPL26L1Q9UNX3 145 aaKnown RBP14.6□□□□□ -0.07
SGCE-204ENST00000428696 DMTF1Q9Y222 760 aa14.6□□□□□ -0.07
SGCE-204ENST00000428696 C1orf232A0A0U1RR37 186 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 FPGTO14772 594 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 RAD51BO15315 384 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 RECQL5O94762 991 aaPredicted RBP14.59□□□□□ -0.07
SGCE-204ENST00000428696 CLDN7O95471 211 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 PCCBP05166 539 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 CD38P28907 300 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 RPL22P35268 128 aaKnown RBP14.59□□□□□ -0.07
SGCE-204ENST00000428696 COILP38432 576 aaPredicted RBP14.59□□□□□ -0.07
SGCE-204ENST00000428696 LMNB2Q03252 620 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 LRRC14Q15048 493 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 P3H1Q32P28 736 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 SIRPB2Q5JXA9 342 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 LRRC66Q68CR7 880 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 CCDC137Q6PK04 289 aaKnown RBP14.59□□□□□ -0.07
SGCE-204ENST00000428696 KDELC1Q6UW63 502 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 HSD11B1LQ7Z5J1 315 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 KLHL7Q8IXQ5 586 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 GLIS1Q8NBF1 620 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 CCHCR1Q8TD31 782 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 BLOC1S5Q8TDH9 187 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 MRGPRX2Q96LB1 330 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 PPP1R2P1Q96PQ5 205 aa14.59□□□□□ -0.07
SGCE-204ENST00000428696 TTC7AQ9ULT0 858 aaPredicted RBP14.59□□□□□ -0.07
SGCE-204ENST00000428696 FNDC3AQ9Y2H6 1198 aaKnown RBP14.59□□□□□ -0.07
SGCE-204ENST00000428696 CAPN8A6NHC0 703 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 H0Y8X5 98 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 URI1O94763 535 aaPredicted RBP14.58□□□□□ -0.07
SGCE-204ENST00000428696 HEXIM1O94992 359 aaKnown RBP14.58□□□□□ -0.07
SGCE-204ENST00000428696 ZNF806P0C7X5 589 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 LHCGRP22888 699 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 HOXD12P35452 270 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 NUDT1P36639 197 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 ETV3P41162 512 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 RALGDSQ12967 914 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 CNGA3Q16281 694 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 CSRP2Q16527 193 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 PLA2G2CQ5R387 149 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 PRAMEF14Q5SWL7 426 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 TTC27Q6P3X3 843 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 DRICH1Q6PGQ1 229 aaPredicted RBP14.58□□□□□ -0.07
SGCE-204ENST00000428696 KDM7AQ6ZMT4 941 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 Q6ZSR6 202 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 Q6ZVL8 140 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 PTAR1Q7Z6K3 402 aaPredicted RBP14.58□□□□□ -0.07
SGCE-204ENST00000428696 CREG2Q8IUH2 290 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 PDCD7Q8N8D1 485 aaKnown RBP14.58□□□□□ -0.07
SGCE-204ENST00000428696 TADA1Q96BN2 335 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 KLHDC7BQ96G42 594 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 TBL1YQ9BQ87 522 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 ETNK1Q9HBU6 452 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 MBNL1Q9NR56 388 aaKnown RBP14.58□□□□□ -0.07
SGCE-204ENST00000428696 PAK5Q9P286 719 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 CD84Q9UIB8 345 aa14.58□□□□□ -0.07
SGCE-204ENST00000428696 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.58□□□□□ -0.07
SGCE-204ENST00000428696 FANCGO15287 622 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 PSMD3O43242 534 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 PHF2O75151 1096 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 SYPP08247 313 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 BASP1P80723 227 aaKnown RBP14.58□□□□□ -0.08
SGCE-204ENST00000428696 PTSQ03393 145 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 PPP1R7Q15435 360 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 SLC1A5Q15758 541 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 WSCD2Q2TBF2 565 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 RFLNAQ6ZTI6 216 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 LYSMD3Q7Z3D4 306 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 ZSCAN30Q86W11 494 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 OR2I1PQ8NGU4 316 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 MCCC1Q96RQ3 725 aaPredicted RBP14.58□□□□□ -0.08
SGCE-204ENST00000428696 TRIB3Q96RU7 358 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 GORASP1Q9BQQ3 440 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 ORAI3Q9BRQ5 295 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 ZFYVE1Q9HBF4 777 aa14.58□□□□□ -0.08
SGCE-204ENST00000428696 PIH1D1Q9NWS0 290 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms