RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ITPKBP27987 946 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 USP4Q13107 963 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 SLC10A6Q3KNW5 377 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 ZNF398Q8TD17 642 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 MORF4L1Q9UBU8 362 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 PCDHGC5Q9Y5F6 944 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 DOT1LQ8TEK3 1739 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 IQCMA0A1B0GVH7 501 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 TMEM191CA6NGB0 347 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 AQP1P29972 269 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 RANBP1P43487 201 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 HYIQ5T013 277 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 SLC4A11Q8NBS3 891 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 ALG3Q92685 438 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 JSRP1Q96MG2 331 aaPredicted RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 ZIC5Q96T25 663 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 DHX33Q9H6R0 707 aaKnown RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 SNX15Q9NRS6 342 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 H3BMM5 538 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 ARVCFO00192 962 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 VIPP01282 170 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 HGFP14210 728 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 PAICSP22234 425 aaKnown RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 AGMOQ6ZNB7 445 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 BHLHE22Q8NFJ8 381 aaPredicted RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 C7orf43Q8WVR3 580 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 TNFRSF25Q93038 417 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 PSMG2Q969U7 264 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 KLHL32Q96NJ5 620 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 GLOD4Q9HC38 313 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 POLR3HQ9Y535 204 aaPredicted RBP9.75□□□□□ -0.85
SNX13-203ENST00000428135 LTBP3Q9NS15 1303 aa9.75□□□□□ -0.85
SNX13-203ENST00000428135 IGLV3-22A0A075B6J6 115 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 SNTNA6NMZ2 147 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 CLDN11O75508 207 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 LBPP18428 481 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 BUD31P41223 144 aaPredicted RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 IDH2P48735 452 aaKnown RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 SKP1P63208 163 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 FOXM1Q08050 763 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 MINDY4Q4G0A6 757 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 GPR141Q7Z602 305 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 CYP4Z2PQ8N1L4 340 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 ZCCHC10Q8TBK6 192 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 TRIB2Q92519 343 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 MBOAT7Q96N66 472 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 NIFKQ9BYG3 293 aaKnown RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 KLHL4Q9C0H6 718 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 RXFP1Q9HBX9 757 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 PSME2Q9UL46 239 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 DDX3YO15523 660 aaKnown RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 CNOT3O75175 753 aaKnown RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 EFNA1P20827 205 aaPredicted RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 CLCN5P51795 746 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 DLG2Q15700 870 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 BRINP2Q9C0B6 783 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 ARHGEF4Q9NR80 690 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 A0A1W2PQ45 241 aaPredicted RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 A0A1W2PQY0 241 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 C9JVG2 144 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 SGTAO43765 313 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 MAGEC1O60732 1142 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 HIST1H2ABP04908 130 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 ITGAVP06756 1048 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 PTPN4P29074 926 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 GDI1P31150 447 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 HNRNPH1P31943 449 aaKnown RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 RPL4P36578 427 aaKnown RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 DGKEP52429 567 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 MPP1Q00013 466 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 MTAPQ13126 283 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 CEP78Q5JTW2 689 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 LCLAT1Q6UWP7 414 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 VSTM1Q6UX27 236 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 GPRIN3Q6ZVF9 776 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 HIST3H2AQ7L7L0 130 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 CCDC103Q8IW40 242 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 HDDC3Q8N4P3 179 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 HIST1H2ACQ93077 130 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 AP2M1Q96CW1 435 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 EBNA1BP2Q99848 306 aaKnown RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 SGK2Q9HBY8 427 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 ARHGAP28Q9P2N2 729 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 STXBP5LQ9Y2K9 1186 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 TNPO3Q9Y5L0 923 aaKnown RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 TRIM43BA6NCK2 446 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 ZNF37AP17032 561 aaPredicted RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 MAPK8P45983 427 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 BRMS1LQ5PSV4 323 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 OR6Y1Q8NGX8 325 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 GDPD5Q8WTR4 605 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 SNRNP27Q8WVK2 155 aaKnown RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 AZIN2Q96A70 460 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 APOBEC3GQ9HC16 384 aaKnown RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 MYBL2P10244 700 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 H2AFXP16104 143 aaPredicted RBP9.74□□□□□ -0.85
SNX13-203ENST00000428135 CAP1Q01518 475 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 CYP4F3Q08477 520 aa9.74□□□□□ -0.85
SNX13-203ENST00000428135 AUHQ13825 339 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms