RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PELI3Q8N2H9 469 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.46■□□□□ 0.55
PSPC1-202ENST00000427943 KCTD6Q8NC69 237 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 LRRN4Q8WUT4 740 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 FUBP1Q96AE4 644 aaKnown RBP18.46■□□□□ 0.55
PSPC1-202ENST00000427943 DEPDC7Q96QD5 511 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 CHP1Q99653 195 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 ABHD10Q9NUJ1 306 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 SPTLC3Q9NUV7 552 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 ZNHIT6Q9NWK9 470 aaKnown RBP18.46■□□□□ 0.55
PSPC1-202ENST00000427943 NCKIPSDQ9NZQ3 722 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 SIRPGQ9P1W8 387 aa18.46■□□□□ 0.55
PSPC1-202ENST00000427943 ARHGEF17Q96PE2 2063 aaPredicted RBP18.46■□□□□ 0.55
PSPC1-202ENST00000427943 SSU72P8A0A1W2PR75 194 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 AKR1B10O60218 316 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 BRINP1O60477 761 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 MFAP3LO75121 409 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 CSO75390 466 aaKnown RBP18.45■□□□□ 0.54
PSPC1-202ENST00000427943 VIPR1P32241 457 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 GARSP41250 739 aaKnown RBP18.45■□□□□ 0.54
PSPC1-202ENST00000427943 ITKQ08881 620 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 GALNT2Q10471 571 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 MESDQ14696 234 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 PAFAH1B3Q15102 231 aaKnown RBP18.45■□□□□ 0.54
PSPC1-202ENST00000427943 ELOCQ15369 112 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 ANKRD20A8PQ5CZ79 823 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 ZFYVE27Q5T4F4 411 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 FSTL5Q8N475 847 aaPredicted RBP18.45■□□□□ 0.54
PSPC1-202ENST00000427943 OR1E3Q8WZA6 343 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 GLMNQ92990 594 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 NUS1Q96E22 293 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 SEMA3CQ99985 751 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 ZNF670Q9BS34 389 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 FGF22Q9HCT0 170 aa18.45■□□□□ 0.54
PSPC1-202ENST00000427943 MRPL40Q9NQ50 206 aaKnown RBP18.45■□□□□ 0.54
PSPC1-202ENST00000427943 ZFC3H1O60293 1989 aaKnown RBP18.44■□□□□ 0.54
PSPC1-202ENST00000427943 A0A1W2PQ67 120 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 TMEM202A6NGA9 273 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 NPIPB15A6NHN6 443 aaPredicted RBP18.44■□□□□ 0.54
PSPC1-202ENST00000427943 CACNB4O00305 520 aaPredicted RBP18.44■□□□□ 0.54
PSPC1-202ENST00000427943 CASC3O15234 703 aaKnown RBP18.44■□□□□ 0.54
PSPC1-202ENST00000427943 HEXIM1O94992 359 aaKnown RBP18.44■□□□□ 0.54
PSPC1-202ENST00000427943 KRT7P08729 469 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 TPM1P09493 284 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 ALPIP09923 528 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 TMEM253P0C7T8 217 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 CTPS1P17812 591 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 LHCGRP22888 699 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 RPIAP49247 311 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 KIAA1024LP59773 190 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 PDK2Q15119 407 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 ESRP1Q6NXG1 681 aaKnown RBP18.44■□□□□ 0.54
PSPC1-202ENST00000427943 TEX26Q8N6G2 289 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 KYQ8NBH2 561 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 OR56A4Q8NGH8 313 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 ATL2Q8NHH9 583 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 SPOCK2Q92563 424 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 COQ10AQ96MF6 247 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 LGR4Q9BXB1 951 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 SYNDIG1Q9H7V2 258 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 GULP1Q9UBP9 304 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 PHTF1Q9UMS5 762 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 TTLL3Q9Y4R7 772 aa18.44■□□□□ 0.54
PSPC1-202ENST00000427943 A0A087WV48 116 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 A0A0U1RQS6 177 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 PGLSO95336 258 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 TNFP01375 233 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 MPOP05164 745 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 PDHA1P08559 390 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 CYP2A6P11509 494 aaPredicted RBP18.43■□□□□ 0.54
PSPC1-202ENST00000427943 DSC2Q02487 901 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 GBE1Q04446 702 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 TSR1Q2NL82 804 aaKnown RBP18.43■□□□□ 0.54
PSPC1-202ENST00000427943 RALGPS1Q5JS13 557 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 ARMC12Q5T9G4 340 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 TIGD7Q6NT04 549 aaPredicted RBP18.43■□□□□ 0.54
PSPC1-202ENST00000427943 PNCKQ6P2M8 343 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 HSD11B1LQ7Z5J1 315 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 TSPAN33Q86UF1 283 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 PQLC3Q8N755 202 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 FAF2Q96CS3 445 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 CRELD1Q96HD1 420 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 SMIM14Q96QK8 99 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 POLR1EQ9GZS1 481 aaKnown RBP18.43■□□□□ 0.54
PSPC1-202ENST00000427943 WDR26Q9H7D7 661 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 MOSPD1Q9UJG1 213 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 PADI4Q9UM07 663 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 RAI2Q9Y5P3 530 aa18.43■□□□□ 0.54
PSPC1-202ENST00000427943 GOLGA6CA6NDK9 693 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 GOLGA6BA6NDN3 693 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 USP12O75317 370 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 GOLGA6DP0CG33 693 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 MAN1A1P33908 653 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 ETV3P41162 512 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 IFI16Q16666 785 aaKnown RBP18.42■□□□□ 0.54
PSPC1-202ENST00000427943 USP45Q70EL2 814 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 PDZD3Q86UT5 571 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 GKN2Q86XP6 184 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 LRRC49Q8IUZ0 686 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 MAP7D3Q8IWC1 876 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms