RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 LRRC38Q5VT99 294 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 MARCH9Q86YJ5 346 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 TPCN2Q8NHX9 752 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 LRRN4Q8WUT4 740 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 MAML1Q92585 1016 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 HDAC11Q96DB2 347 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 NUS1Q96E22 293 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 SCRN2Q96FV2 425 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 NSMCE3Q96MG7 304 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 WDR92Q96MX6 357 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 USP29Q9HBJ7 922 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 DTLQ9NZJ0 730 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 SALL4Q9UJQ4 1053 aa20.72■□□□□ 0.91
HSPG2-205ENST00000427897 LRRK1Q38SD2 2015 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 CPED1A4D0V7 1026 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 TRABD2BA6NFA1 517 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 ZNF487B1APH4 448 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 PDE2AO00408 941 aaPredicted RBP20.71■□□□□ 0.91
HSPG2-205ENST00000427897 TPP1O14773 563 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 PPP1R12AO14974 1030 aaPredicted RBP20.71■□□□□ 0.91
HSPG2-205ENST00000427897 ALPIP09923 528 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 CKMT1AP12532 417 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 HK3P52790 923 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 SRP54P61011 504 aaKnown RBP20.71■□□□□ 0.91
HSPG2-205ENST00000427897 DYNLT1P63172 113 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 DSC2Q02487 901 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 SLC10A2Q12908 348 aaPredicted RBP20.71■□□□□ 0.91
HSPG2-205ENST00000427897 ESRP1Q6NXG1 681 aaKnown RBP20.71■□□□□ 0.91
HSPG2-205ENST00000427897 BZW1Q7L1Q6 419 aaKnown RBP20.71■□□□□ 0.91
HSPG2-205ENST00000427897 VSIG1Q86XK7 387 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 PDCD7Q8N8D1 485 aaKnown RBP20.71■□□□□ 0.91
HSPG2-205ENST00000427897 FAM181AQ8N9Y4 354 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 PLA2G15Q8NCC3 412 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 FATE1Q969F0 183 aa20.71■□□□□ 0.91
HSPG2-205ENST00000427897 TCEAL2Q9H3H9 227 aaPredicted RBP20.71■□□□□ 0.91
HSPG2-205ENST00000427897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.71■□□□□ 0.91
HSPG2-205ENST00000427897 HEXIM1O94992 359 aaKnown RBP20.7■□□□□ 0.9
HSPG2-205ENST00000427897 JCHAINP01591 159 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 MYF5P13349 255 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 TARDBPQ13148 414 aaKnown RBP eCLIP20.7■□□□□ 0.9
HSPG2-205ENST00000427897 PDK1Q15118 436 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 TCEAL1Q15170 157 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 NR0B2Q15466 257 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 TCEA2Q15560 299 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 CNGA3Q16281 694 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 GKN2Q86XP6 184 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 TMTC1Q8IUR5 882 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 FSTL5Q8N475 847 aaPredicted RBP20.7■□□□□ 0.9
HSPG2-205ENST00000427897 TBATAQ96M53 351 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 PANX2Q96RD6 677 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 LGMNQ99538 433 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 WDR26Q9H7D7 661 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 SEPT10Q9P0V9 454 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 CHKBQ9Y259 395 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 ALG6Q9Y672 507 aa20.7■□□□□ 0.9
HSPG2-205ENST00000427897 KCNK1O00180 336 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 GIMD1P0DJR0 217 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 TSHRP16473 764 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 CLDN6P56747 220 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 TFDP2Q14188 446 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 CDKN3Q16667 212 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 ALG11Q2TAA5 492 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 KAZNQ674X7 775 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 PNCKQ6P2M8 343 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 CCDC50Q8IVM0 306 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 OR56A4Q8NGH8 313 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 IFI44Q8TCB0 444 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 SPOCK2Q92563 424 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 COQ10AQ96MF6 247 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 LRRC61Q9BV99 259 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 PHPT1Q9NRX4 125 aaPredicted RBP20.69■□□□□ 0.9
HSPG2-205ENST00000427897 GULP1Q9UBP9 304 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 DNPEPQ9ULA0 475 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 CLCA2Q9UQC9 943 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 EPN1Q9Y6I3 576 aaPredicted RBP20.69■□□□□ 0.9
HSPG2-205ENST00000427897 AK5Q9Y6K8 562 aa20.69■□□□□ 0.9
HSPG2-205ENST00000427897 NPIPB15A6NHN6 443 aaPredicted RBP20.68■□□□□ 0.9
HSPG2-205ENST00000427897 LMO7DNF2Z398 122 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 PSMD11O00231 422 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 YY2O15391 372 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 PSTPIP1O43586 416 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 GCATO75600 419 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 LCA5LO95447 670 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 HLA-DQB2P05538 268 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 PDHA1P08559 390 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 CDC25BP30305 580 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 HADHBP55084 474 aaKnown RBP20.68■□□□□ 0.9
HSPG2-205ENST00000427897 PPIDQ08752 370 aaKnown RBP20.68■□□□□ 0.9
HSPG2-205ENST00000427897 SLC9A4Q6AI14 798 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 DAAM2Q86T65 1068 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 SDR16C5Q8N3Y7 309 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 PLD5Q8N7P1 536 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 MDM1Q8TC05 714 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 MAPK15Q8TD08 544 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 PIH1D2Q8WWB5 315 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 FUBP1Q96AE4 644 aaKnown RBP20.68■□□□□ 0.9
HSPG2-205ENST00000427897 PCDH9Q9HC56 1237 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 PLXNB3Q9ULL4 1909 aa20.68■□□□□ 0.9
HSPG2-205ENST00000427897 C3orf70A6NLC5 250 aaPredicted RBP20.67■□□□□ 0.9
HSPG2-205ENST00000427897 KRT37O76014 449 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms