RNA–Protein interactions for RNA: ENST00000427737.5

TUBA4A-205, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-205ENST00000427737 MARC1Q5VT66 337 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 CRTC1Q6UUV9 634 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 H2AFVQ71UI9 128 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 EFL1Q7Z2Z2 1120 aaKnown RBP12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 BBS5Q8N3I7 341 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 RNF214Q8ND24 703 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 PCDH19Q8TAB3 1148 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 MAPK15Q8TD08 544 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 NSMCE1Q8WV22 266 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 WDR92Q96MX6 357 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 DEPDC7Q96QD5 511 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 ZNF670Q9BS34 389 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 ABCG4Q9H172 646 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 TSPY26PQ9H489 355 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 DEF6Q9H4E7 631 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 ABHD10Q9NUJ1 306 aa12.52□□□□□ -0.41
TUBA4A-205ENST00000427737 COL27A1Q8IZC6 1860 aaPredicted RBP12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 SHROOM3Q8TF72 1996 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 A0A087WV48 116 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 SSU72P8A0A1W2PR75 194 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 TMEM202A6NGA9 273 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 TLX3O43711 291 aaPredicted RBP12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 BRINP1O60477 761 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 MFAP3LO75121 409 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 CSO75390 466 aaKnown RBP12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 CTSEP14091 401 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 KIAA1024LP59773 190 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 GALNT2Q10471 571 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 PAFAH1B3Q15102 231 aaKnown RBP12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 PTPRRQ15256 657 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 ELOCQ15369 112 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 ANKRD20A8PQ5CZ79 823 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 RALGPS1Q5JS13 557 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 PERM1Q5SV97 790 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 ESRP1Q6NXG1 681 aaKnown RBP12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 LRRC49Q8IUZ0 686 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 VSTM4Q8IW00 320 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 PELI3Q8N2H9 469 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 FSTL5Q8N475 847 aaPredicted RBP12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 KCTD6Q8NC69 237 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 ATL2Q8NHH9 583 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 OR1E3Q8WZA6 343 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 FUBP1Q96AE4 644 aaKnown RBP12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 COQ10AQ96MF6 247 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 FGF22Q9HCT0 170 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 NT5MQ9NPB1 228 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 DOLKQ9UPQ8 538 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 KNTC1P50748 2209 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 ZNF462Q96JM2 2506 aa12.51□□□□□ -0.41
TUBA4A-205ENST00000427737 A0A1W2PQ67 120 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 NPIPB15A6NHN6 443 aaPredicted RBP12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 CACNB4O00305 520 aaPredicted RBP12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 CASC3O15234 703 aaKnown RBP12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 AKR1B10O60218 316 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 USP12O75317 370 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 HEXIM1O94992 359 aaKnown RBP12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 PGLSO95336 258 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 KRT7P08729 469 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 ALPIP09923 528 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 TMEM253P0C7T8 217 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 LHCGRP22888 699 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 VIPR1P32241 457 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 MAN1A1P33908 653 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 TRIM23P36406 574 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 RPIAP49247 311 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 PDK2Q15119 407 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 ARMC12Q5T9G4 340 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 DENND2CQ68D51 928 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 TEX26Q8N6G2 289 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 PQLC3Q8N755 202 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 ARL10Q8N8L6 244 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 KYQ8NBH2 561 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 OR56A4Q8NGH8 313 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 LRRN4Q8WUT4 740 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 GLMNQ92990 594 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 FAF2Q96CS3 445 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 NUS1Q96E22 293 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 CRELD1Q96HD1 420 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 RBM15Q96T37 977 aaKnown RBP eCLIP12.5□□□□□ -0.416e-10■■■■■ 36.7
TUBA4A-205ENST00000427737 CHP1Q99653 195 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 SEMA3CQ99985 751 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 LGR4Q9BXB1 951 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 POLR1EQ9GZS1 481 aaKnown RBP12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 WDR26Q9H7D7 661 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 MRPL40Q9NQ50 206 aaKnown RBP12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 SPTLC3Q9NUV7 552 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 ZNHIT6Q9NWK9 470 aaKnown RBP12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 SIRPGQ9P1W8 387 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 LCMT1Q9UIC8 334 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 PADI4Q9UM07 663 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 PHTF1Q9UMS5 762 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 DGKBQ9Y6T7 804 aa12.5□□□□□ -0.41
TUBA4A-205ENST00000427737 A0A0U1RQS6 177 aa12.49□□□□□ -0.41
TUBA4A-205ENST00000427737 MPOP05164 745 aa12.49□□□□□ -0.41
TUBA4A-205ENST00000427737 PDHA1P08559 390 aa12.49□□□□□ -0.41
TUBA4A-205ENST00000427737 TPM1P09493 284 aa12.49□□□□□ -0.41
TUBA4A-205ENST00000427737 CTPS1P17812 591 aa12.49□□□□□ -0.41
TUBA4A-205ENST00000427737 EIF2S3P41091 472 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms