RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 CR2P20023 1033 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 VIPR1P32241 457 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 ERVPABLB-1P60509 514 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 SPIDRQ14159 915 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 PERM1Q5SV97 790 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 CCDC122Q5T0U0 273 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 MARC1Q5VT66 337 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 CRTC1Q6UUV9 634 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 USP45Q70EL2 814 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 ZNF248Q8NDW4 579 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 NUS1Q96E22 293 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 RBM15Q96T37 977 aaKnown RBP eCLIP16.84■□□□□ 0.29
CCDC78-203ENST00000423653 LGMNQ99538 433 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 CCDC3Q9BQI4 270 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 SYNDIG1Q9H7V2 258 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 SIRPGQ9P1W8 387 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 UVRAGQ9P2Y5 699 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 GULP1Q9UBP9 304 aa16.84■□□□□ 0.29
CCDC78-203ENST00000423653 PEX11BO96011 259 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 CELA2BP08218 269 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-203ENST00000423653 HOXC4P09017 264 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-203ENST00000423653 ITPKBP27987 946 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 TRIM14Q14142 442 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 TSR1Q2NL82 804 aaKnown RBP16.83■□□□□ 0.28
CCDC78-203ENST00000423653 C3orf38Q5JPI3 329 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 TXNRD3NBQ6F5E7 133 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 TIGD7Q6NT04 549 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-203ENST00000423653 IGF2-ASQ6U949 168 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 COL27A1Q8IZC6 1860 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-203ENST00000423653 PLA2G15Q8NCC3 412 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 CTNNBL1Q8WYA6 563 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-203ENST00000423653 FUBP1Q96AE4 644 aaKnown RBP16.83■□□□□ 0.28
CCDC78-203ENST00000423653 ZNF670Q9BS34 389 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 NOD2Q9HC29 1040 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 CTTNBP2NLQ9P2B4 639 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 PHTF1Q9UMS5 762 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 PCDHGC4Q9Y5F7 938 aa16.83■□□□□ 0.28
CCDC78-203ENST00000423653 SHROOM3Q8TF72 1996 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 PSMD11O00231 422 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 MFSD11O43934 449 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 MYCLP1P12525 358 aaPredicted RBP16.82■□□□□ 0.28
CCDC78-203ENST00000423653 RBMS1P29558 406 aaKnown RBP16.82■□□□□ 0.28
CCDC78-203ENST00000423653 CASP14P31944 242 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 GJC1P36383 396 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 TRIM23P36406 574 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 CCDC173Q0VFZ6 552 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 ARHGEF7Q14155 803 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 TCEA2Q15560 299 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 CNGA3Q16281 694 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 ZSCAN23Q3MJ62 389 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 ARMC12Q5T9G4 340 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 MAP7D3Q8IWC1 876 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 NDUFAF2Q8N183 169 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 PGBD5Q8N414 524 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 FAM71BQ8TC56 605 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 OR1E3Q8WZA6 343 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 CCDC74AQ96AQ1 378 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 COQ10AQ96MF6 247 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 UBL7Q96S82 380 aaPredicted RBP16.82■□□□□ 0.28
CCDC78-203ENST00000423653 POLR1EQ9GZS1 481 aaKnown RBP16.82■□□□□ 0.28
CCDC78-203ENST00000423653 DEF6Q9H4E7 631 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 FGF22Q9HCT0 170 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 PHPT1Q9NRX4 125 aaPredicted RBP16.82■□□□□ 0.28
CCDC78-203ENST00000423653 SATB2Q9UPW6 733 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 ENTPD2Q9Y5L3 495 aa16.82■□□□□ 0.28
CCDC78-203ENST00000423653 PRSS38A1L453 326 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 EIF4E1BA6NMX2 242 aaKnown RBP16.81■□□□□ 0.28
CCDC78-203ENST00000423653 A8MX80 341 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 CBFA2T2O43439 604 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 HEXIM1O94992 359 aaKnown RBP16.81■□□□□ 0.28
CCDC78-203ENST00000423653 PGLSO95336 258 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 KRT7P08729 469 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 TPM1P09493 284 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 H2AFZP0C0S5 128 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 HOXB3P14651 431 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-203ENST00000423653 GM2AP17900 193 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 CA4P22748 312 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 HNRNPH3P31942 346 aaKnown RBP16.81■□□□□ 0.28
CCDC78-203ENST00000423653 GARSP41250 739 aaKnown RBP16.81■□□□□ 0.28
CCDC78-203ENST00000423653 MLLT3P42568 568 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-203ENST00000423653 UCNP55089 124 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 MAXP61244 160 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 GALNT2Q10471 571 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 TRAF2Q12933 501 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 PDK2Q15119 407 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 BROXQ5VW32 411 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 PNCKQ6P2M8 343 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 H2AFVQ71UI9 128 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 TAF8Q7Z7C8 310 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 SPACA3Q8IXA5 215 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 KIAA1524Q8TCG1 905 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 DTD2Q96FN9 168 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 ATXN7L3BQ96GX2 97 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 CRELD1Q96HD1 420 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 HIC2Q96JB3 615 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 FCRL3Q96P31 734 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-203ENST00000423653 XPO4Q9C0E2 1151 aaKnown RBP16.81■□□□□ 0.28
CCDC78-203ENST00000423653 NT5MQ9NPB1 228 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 PCDHGA8Q9Y5G5 932 aa16.81■□□□□ 0.28
CCDC78-203ENST00000423653 ASXL3Q9C0F0 2248 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms