RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZNF683Q8IZ20 524 aa11.96□□□□□ -0.49
PTPRN-204ENST00000423636 PHC3Q8NDX5 983 aa11.96□□□□□ -0.49
PTPRN-204ENST00000423636 MDGA1Q8NFP4 955 aa11.96□□□□□ -0.49
PTPRN-204ENST00000423636 STYXQ8WUJ0 223 aa11.96□□□□□ -0.49
PTPRN-204ENST00000423636 ACOX2Q99424 681 aa11.96□□□□□ -0.49
PTPRN-204ENST00000423636 MRPL46Q9H2W6 279 aaKnown RBP11.96□□□□□ -0.49
PTPRN-204ENST00000423636 PRM3Q9NNZ6 103 aa11.96□□□□□ -0.49
PTPRN-204ENST00000423636 FKBPLQ9UIM3 349 aa11.96□□□□□ -0.49
PTPRN-204ENST00000423636 POMPQ9Y244 141 aa11.96□□□□□ -0.49
PTPRN-204ENST00000423636 ASB1Q9Y576 335 aa11.96□□□□□ -0.49
PTPRN-204ENST00000423636 PCDHB9Q9Y5E1 797 aa11.96□□□□□ -0.49
PTPRN-204ENST00000423636 DPPA5A6NC42 116 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 AXIN1O15169 862 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 TPST1O60507 370 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 KLHL2O95198 593 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 CCNIQ14094 377 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 OR4D1Q15615 310 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 RNF220Q5VTB9 566 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 TIGD7Q6NT04 549 aaPredicted RBP11.96□□□□□ -0.5
PTPRN-204ENST00000423636 PSAPL1Q6NUJ1 521 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 OTOP2Q7RTS6 562 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 PTGR2Q8N8N7 351 aaPredicted RBP11.96□□□□□ -0.5
PTPRN-204ENST00000423636 C2CD4AQ8NCU7 369 aaPredicted RBP11.96□□□□□ -0.5
PTPRN-204ENST00000423636 MKS1Q9NXB0 559 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 STOML1Q9UBI4 398 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 CDYLQ9Y232 598 aa11.96□□□□□ -0.5
PTPRN-204ENST00000423636 HEATR9A2RTY3 570 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 ENO4A6NNW6 628 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 CD3EAPO15446 510 aaKnown RBP11.95□□□□□ -0.5
PTPRN-204ENST00000423636 PEX1O43933 1283 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 GUCA1CO95843 209 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 S1PR4O95977 384 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 SLC2A3P11169 496 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 PAMP19021 973 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 DEFB103AP81534 67 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 BTKQ06187 659 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 MMEL1Q495T6 779 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 C6orf163Q5TEZ5 329 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 POTEHQ6S545 545 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 SPRED2Q7Z698 418 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 MYLK4Q86YV6 388 aaPredicted RBP11.95□□□□□ -0.5
PTPRN-204ENST00000423636 CAMK1DQ8IU85 385 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 DSELQ8IZU8 1212 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 MAB21L3Q8N8X9 362 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 SIDT2Q8NBJ9 832 aaKnown RBP11.95□□□□□ -0.5
PTPRN-204ENST00000423636 GCNAQ96QF7 691 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 CINPQ9BW66 212 aaPredicted RBP11.95□□□□□ -0.5
PTPRN-204ENST00000423636 SUPT3HB4E1H0 165 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 H0Y626 953 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 SMAD6O43541 496 aaKnown RBP11.95□□□□□ -0.5
PTPRN-204ENST00000423636 KATNA1O75449 491 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 SUPT3HO75486 399 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 RHOBTB1O94844 696 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 GLP2RO95838 553 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 RHOCP08134 193 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 MBL2P11226 248 aaPredicted RBP11.95□□□□□ -0.5
PTPRN-204ENST00000423636 APLP1P51693 650 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 GNA12Q03113 381 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 TLE2Q04725 743 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 NOGQ13253 232 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 ART3Q13508 389 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 GK3PQ14409 553 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 TRIP4Q15650 581 aaPredicted RBP11.95□□□□□ -0.5
PTPRN-204ENST00000423636 SLC44A4Q53GD3 710 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 CYS1Q717R9 158 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 GLT6D1Q7Z4J2 308 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 CUZD1Q86UP6 607 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 KDM1BQ8NB78 822 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 UROC1Q96N76 676 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 C1orf50Q9BV19 199 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 DRC3Q9H069 523 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 EBF3Q9H4W6 596 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 COPS7BQ9H9Q2 264 aaPredicted RBP11.95□□□□□ -0.5
PTPRN-204ENST00000423636 VPS45Q9NRW7 570 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 NDE1Q9NXR1 346 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 ATG2BQ96BY7 2078 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 NLRC5Q86WI3 1866 aa11.95□□□□□ -0.5
PTPRN-204ENST00000423636 TRIM24O15164 1050 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 GPC4O75487 556 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 C1RP00736 705 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 MT-ND1P03886 318 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 PSMC3P17980 439 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 AOC1P19801 751 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 VHLP40337 213 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 SMAD3P84022 425 aaKnown RBP11.94□□□□□ -0.5
PTPRN-204ENST00000423636 SULT2A1Q06520 285 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
PTPRN-204ENST00000423636 CAPRIN1Q14444 709 aaKnown RBP11.94□□□□□ -0.5
PTPRN-204ENST00000423636 TSNQ15631 228 aaKnown RBP11.94□□□□□ -0.5
PTPRN-204ENST00000423636 SFT2D3Q587I9 215 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 ZNF333Q96JL9 665 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 POLR1EQ9GZS1 481 aaKnown RBP11.94□□□□□ -0.5
PTPRN-204ENST00000423636 PIDD1Q9HB75 910 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 MID1IP1Q9NPA3 183 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 TMEM248Q9NWD8 314 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 RAP2CQ9Y3L5 183 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 NPEPPSL1A6NEC2 478 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 CAPN8A6NHC0 703 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 TBL1XO60907 577 aa11.94□□□□□ -0.5
PTPRN-204ENST00000423636 UGT1A6P19224 532 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms