RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 C9orf172C9J069 976 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 PALMO75781 387 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 ITGB6P18564 788 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 CD82P27701 267 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 PAPOLAP51003 745 aaKnown RBP16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 MAPK10P53779 464 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 POLR2LP62875 67 aaKnown RBP16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 B4GALNT1Q00973 533 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 BCL2L1Q07817 233 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 NSUN2Q08J23 767 aaKnown RBP eCLIP16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 KRT31Q15323 416 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 TSR1Q2NL82 804 aaKnown RBP16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 PPP1R15BQ5SWA1 713 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 PHF19Q5T6S3 580 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 CDKAL1Q5VV42 579 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 DPPA4Q7L190 304 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 TMPRSS9Q7Z410 1059 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 VASH2Q86V25 355 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 ENOX1Q8TC92 643 aaKnown RBP16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 KIAA1524Q8TCG1 905 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 CELF6Q96J87 481 aaKnown RBP16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 SLC39A8Q9C0K1 460 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 CYP4F12Q9HCS2 524 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 FOXJ2Q9P0K8 574 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 SIK3Q9Y2K2 1263 aa16.92■□□□□ 0.3
UPF3AP3-201ENST00000420996 AGRPO00253 132 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 PDE2AO00408 941 aaPredicted RBP16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 TERTO14746 1132 aaKnown RBP16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 DESP17661 470 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 GM2AP17900 193 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 PNCKQ6P2M8 343 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 ATG14Q6ZNE5 492 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 PIM3Q86V86 326 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 CCL4L1Q8NHW4 92 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 GPBAR1Q8TDU6 330 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 LGR4Q9BXB1 951 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 NUP62CLQ9H1M0 184 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 SEMA6CQ9H3T2 930 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 WDR26Q9H7D7 661 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 SEPT11Q9NVA2 429 aaKnown RBP16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 AKAP7Q9P0M2 348 aaPredicted RBP16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 MOSPD1Q9UJG1 213 aa16.91■□□□□ 0.3
UPF3AP3-201ENST00000420996 PRSS38A1L453 326 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 EIF3CLB5ME19 914 aaKnown RBP16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 EEF2KO00418 725 aaKnown RBP16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 SUV39H1O43463 412 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 B4GAT1O43505 415 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 CPNE6O95741 557 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 FAM87AP0C7U9 286 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 WT1P19544 449 aaPredicted RBP16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 RFTN1Q14699 578 aaPredicted RBP16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 C16orf72Q14CZ0 275 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 TBR1Q16650 682 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 CLPPQ16740 277 aaPredicted RBP16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 MAP9Q49MG5 647 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 TMEM164Q5U3C3 297 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 DCUN1D2Q6PH85 259 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 C17orf82Q86X59 251 aaPredicted RBP16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 PAF1Q8N7H5 531 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 EIF3CQ99613 913 aaKnown RBP16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 AGPAT1Q99943 283 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 CINPQ9BW66 212 aaPredicted RBP16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 TRIM4Q9C037 500 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 GPATCH2LQ9NWQ4 482 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 AP4E1Q9UPM8 1137 aa16.9■□□□□ 0.3
UPF3AP3-201ENST00000420996 TRAFD1O14545 582 aaPredicted RBP16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 TEX33O43247 280 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 ZW10O43264 779 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 MYCLP1P12525 358 aaPredicted RBP16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 CCNB1P14635 433 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 NFKB2Q00653 900 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 OGDHQ02218 1023 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 ACOX1Q15067 660 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 ZNF438Q7Z4V0 828 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 MCOLN2Q8IZK6 566 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 PELI3Q8N2H9 469 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 NEK11Q8NG66 645 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 COQ10AQ96MF6 247 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 RDH14Q9HBH5 336 aa16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 SPATS2LQ9NUQ6 558 aaKnown RBP16.89■□□□□ 0.29
UPF3AP3-201ENST00000420996 RHPN2P1A8MT19 583 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 A8MX80 341 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 HGSO14964 777 aaPredicted RBP16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 FGF1P05230 155 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 ALDH4A1P30038 563 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 SCNN1BP51168 640 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 MAZP56270 477 aaKnown RBP16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 OR1D5P58170 312 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 AP1S1P61966 158 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 IL10RBQ08334 325 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 NR1D2Q14995 579 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 AMZ1Q400G9 498 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 ERMARDQ5T6L9 678 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 ACAD10Q6JQN1 1059 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 ZNF574Q6ZN55 896 aaPredicted RBP16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 NRROSQ86YC3 692 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 ARHGAP12Q8IWW6 846 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 ZDHHC1Q8WTX9 485 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 HTR3CQ8WXA8 447 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms