RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 LRRC3Q9BY71 257 aa7.43□□□□□ -1.22
BDNF-209ENST00000420794 NOL6Q9H6R4 1146 aaKnown RBP7.43□□□□□ -1.22
BDNF-209ENST00000420794 FBXO6Q9NRD1 293 aaPredicted RBP7.43□□□□□ -1.22
BDNF-209ENST00000420794 CRYL1Q9Y2S2 319 aa7.43□□□□□ -1.22
BDNF-209ENST00000420794 GMNCA6NCL1 334 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 K7ERQ8 282 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 LINC01565O15544 149 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 CACNG3O60359 315 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 PGLSO95336 258 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 PIGNO95427 931 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 HSPA4LO95757 839 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 SYF2O95926 243 aaKnown RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 MT-CO1P00395 513 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 RBP1P09455 135 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 OR56A5P0C7T3 313 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 SLC8A1P32418 973 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 TIE1P35590 1138 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 PSMD8P48556 350 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 SEC13P55735 322 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 EIF4EBP2Q13542 120 aaPredicted RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 CAMK1Q14012 370 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 AFMIDQ63HM1 303 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 FAM45BPQ6NSW5 357 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 NCEH1Q6PIU2 408 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 PRPF39Q86UA1 669 aaKnown RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 EGFL6Q8IUX8 553 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 FAM45AQ8TCE6 357 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ELSPBP1Q96BH3 223 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ULK4Q96C45 1275 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 SHDQ96IW2 340 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 FAM111AQ96PZ2 611 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 KCTD5Q9NXV2 234 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 LIMD1Q9UGP4 676 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ANKRD6Q9Y2G4 727 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ZNF711Q9Y462 761 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 USP15Q9Y4E8 981 aaPredicted RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 GLYATL1P3A0A0U1RQE8 302 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 QSOX1O00391 747 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 TRIM16O95361 564 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 MYL2P10916 166 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 GFAPP14136 432 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 POLD2P49005 469 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 PLK1P53350 603 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ARF5P84085 180 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 OLIG2Q13516 323 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 KRT33BQ14525 404 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 PRSS36Q5K4E3 855 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 TRMT10BQ6PF06 316 aaKnown RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 TPRG1Q6ZUI0 275 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 MARK2Q7KZI7 788 aaKnown RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 WDR75Q8IWA0 830 aaKnown RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 CCNYL1Q8N7R7 359 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ARMC2Q8NEN0 867 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ZNF398Q8TD17 642 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 HEXDCQ8WVB3 486 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 CHMP6Q96FZ7 201 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 APOPT1Q96IL0 206 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 EGFL8Q99944 293 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 MFSD1Q9H3U5 465 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 GEMIN8Q9NWZ8 242 aaKnown RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 GTSE1Q9NYZ3 720 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 NDRG2Q9UN36 371 aaKnown RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 RUVBL2Q9Y230 463 aaKnown RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 HOXC11O43248 304 aaPredicted RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 ALDH1A2O94788 518 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 PENKP01210 267 aaPredicted RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 FMO4P31512 558 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 GPX6P59796 221 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 POU4F1Q01851 419 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 CACNG1Q06432 222 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ELAVL3Q14576 367 aaKnown RBP7.42□□□□□ -1.22
BDNF-209ENST00000420794 EML3Q32P44 896 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 TTMPQ5BVD1 217 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 FAM151BQ6UXP7 276 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 CCDC121Q6ZUS5 278 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 CYS1Q717R9 158 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 TRABD2AQ86V40 505 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 RBFAQ8N0V3 343 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ZNF366Q8N895 744 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ERLEC1Q96DZ1 483 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 CCDC126Q96EE4 140 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 COPS8Q99627 209 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 SH3GL2Q99962 352 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 FAM83DQ9H4H8 585 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 FAM96AQ9H5X1 160 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 MARK1Q9P0L2 795 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 FAM8A1Q9UBU6 413 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 LGALS13Q9UHV8 139 aa7.42□□□□□ -1.22
BDNF-209ENST00000420794 ECI2O75521 394 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 RNASEH2AO75792 299 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 TCF3P15923 654 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 ZNF30P17039 623 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 MAP4P27816 1152 aaKnown RBP7.41□□□□□ -1.22
BDNF-209ENST00000420794 CSNK1DP48730 415 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 TNK2Q07912 1038 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 EFTUD2Q15029 972 aaKnown RBP eCLIP7.41□□□□□ -1.22
BDNF-209ENST00000420794 PTPRNQ16849 979 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 CCDC153Q494R4 210 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 OTOAQ7RTW8 1153 aa7.41□□□□□ -1.22
BDNF-209ENST00000420794 KIRREL3Q8IZU9 778 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms