RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 MYL9P24844 172 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 IDH3AP50213 366 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 CLCN5P51795 746 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 CBR4Q8N4T8 237 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 RAD51AP1Q96B01 352 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 SIPA1Q96FS4 1042 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 B3GNT5Q9BYG0 378 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 TM6SF2Q9BZW4 377 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 NKX1-2Q9UD57 310 aaPredicted RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 PHF11Q9UIL8 331 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 GNPTGQ9UJJ9 305 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 ENTPD4Q9Y227 616 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 ACKR2O00590 384 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 BCKDKO14874 412 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 KPNA5O15131 536 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 RECQL4O94761 1208 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 CD48P09326 243 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 ZNF613Q6PF04 617 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 PAOXQ6QHF9 649 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 OR52L1Q8NGH7 329 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 OR2T34Q8NGX1 318 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 OR2T3Q8NH03 318 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 C1GALT1C1Q96EU7 318 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 SLC4A9Q96Q91 983 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 MRPL45Q9BRJ2 306 aaKnown RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 CNPPD1Q9BV87 410 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 SP140LQ9H930 580 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 SPATA31A1Q5TZJ5 1347 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 ERCC6L2Q5T890 1561 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 DYRK3O43781 588 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 ATF4P18848 351 aaPredicted RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 RPL4P36578 427 aaKnown RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 CASP7P55210 303 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 AHSA2Q719I0 299 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 PHF13Q86YI8 300 aaPredicted RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 ZNF781Q8N8C0 355 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 OR8H1Q8NGG4 311 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 Q96MT0 163 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 FNDC11Q9BVV2 318 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 PSMD10O75832 226 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 NR2F1P10589 423 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 GTF2A2P52657 109 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 ATN1P54259 1190 aaPredicted RBP12.06□□□□□ -0.48
UBR4-205ENST00000417040 HSF2Q03933 536 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 CCDC185Q8N715 623 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 ART5Q96L15 291 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 FCRL4Q96PJ5 515 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 KLHL5Q96PQ7 755 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 BTBD9Q96Q07 612 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 COQ10BQ9H8M1 238 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 UCKL1Q9NWZ5 548 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 DNAJC28Q9NX36 388 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 ALDH2P05091 517 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 SETMARQ53H47 684 aaPredicted RBP12.06□□□□□ -0.48
UBR4-205ENST00000417040 DENND1CQ8IV53 801 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 GPR65Q8IYL9 337 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 DEPDC4Q8N2C3 294 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 ADCY4Q8NFM4 1077 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 SUN5Q8TC36 379 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 ITCHQ96J02 903 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 TDRD1Q9BXT4 1180 aaKnown RBP12.06□□□□□ -0.48
UBR4-205ENST00000417040 FBXO44Q9H4M3 255 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 MALT1Q9UDY8 824 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 ITGB1BP2Q9UKP3 347 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 PCDHAC2Q9Y5I4 1007 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 TNPO3Q9Y5L0 923 aaKnown RBP12.06□□□□□ -0.48
UBR4-205ENST00000417040 DIP2AQ14689 1571 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 FAM92AA1XBS5 289 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 YDJCA8MPS7 323 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 B4GALT5O43286 388 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 MGRN1O60291 552 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 NOL4O94818 638 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 ARSHQ5FYA8 562 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 PLEKHH3Q7Z736 793 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 TRIM74Q86UV6 250 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 TRIM73Q86UV7 250 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 IRF2BP1Q8IU81 584 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 TBC1D21Q8IYX1 336 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 SLC44A1Q8WWI5 657 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 CHCHD6Q9BRQ6 235 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 GSDMCQ9BYG8 508 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 SPG21Q9NZD8 308 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 ANGPT4Q9Y264 503 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 COQ6Q9Y2Z9 468 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 PCDHGA3Q9Y5H0 932 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 PTPRUQ92729 1446 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 IGSF6O95976 241 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 IDO1P14902 403 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 IGFBP5P24593 272 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 STAT5AP42229 794 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 CTSKP43235 329 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 OMPP47874 163 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 XIAPP98170 497 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 KLF1Q13351 362 aaPredicted RBP12.06□□□□□ -0.48
UBR4-205ENST00000417040 TMEM132BQ14DG7 1078 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 TMEM161BQ8NDZ6 487 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 MAGEC3Q8TD91 643 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 SPACA7Q96KW9 195 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 CEP295NLQ96MC4 621 aa12.06□□□□□ -0.48
UBR4-205ENST00000417040 SLC38A2Q96QD8 506 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms