RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 CLPPQ16740 277 aaPredicted RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 HSP90AA4PQ58FG1 418 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 KCTD16Q68DU8 428 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 TMPRSS9Q7Z410 1059 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 PTRH1Q86Y79 214 aaKnown RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 CAMK1DQ8IU85 385 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 SFTPA2Q8IWL1 248 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 PYROXD2Q8N2H3 581 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 MLKLQ8NB16 471 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 RCBTB1Q8NDN9 531 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 ZNF564Q8TBZ8 553 aaPredicted RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 GPBAR1Q8TDU6 330 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 TAAR9Q96RI9 348 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 TUBGCP5Q96RT8 1024 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 GSDMCQ9BYG8 508 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 STK33Q9BYT3 514 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 NOL6Q9H6R4 1146 aaKnown RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 WDR26Q9H7D7 661 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 ATP13A3Q9H7F0 1226 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 SUDS3Q9H7L9 328 aaPredicted RBP10.07□□□□□ -0.8
MDC1-202ENST00000416571 DONSONQ9NYP3 566 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 ANKMY1Q9P2S6 941 aa10.07□□□□□ -0.8
MDC1-202ENST00000416571 PRSS38A1L453 326 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 FGF10O15520 208 aaPredicted RBP10.06□□□□□ -0.8
MDC1-202ENST00000416571 TEX33O43247 280 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 GFPT2O94808 682 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 CYP1A1P04798 512 aaPredicted RBP10.06□□□□□ -0.8
MDC1-202ENST00000416571 CCL4P13236 92 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 DESP17661 470 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 CSTF2P33240 577 aaKnown RBP eCLIP10.06□□□□□ -0.8
MDC1-202ENST00000416571 NSFP46459 744 aaKnown RBP10.06□□□□□ -0.8
MDC1-202ENST00000416571 MAZP56270 477 aaKnown RBP10.06□□□□□ -0.8
MDC1-202ENST00000416571 POLE2P56282 527 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 OR1D5P58170 312 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 B4GALNT1Q00973 533 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 BCL2L1Q07817 233 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 KCNAB2Q13303 367 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 PEX6Q13608 980 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 ACOX1Q15067 660 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 MIIPQ5JXC2 388 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 TRIM72Q6ZMU5 477 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 UMODL1-AS1Q8N2C9 162 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 CCL4L1Q8NHW4 92 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 SLC30A5Q8TAD4 765 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 ZDHHC1Q8WTX9 485 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 SLC20A1Q8WUM9 679 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 CENPIQ92674 756 aaPredicted RBP10.06□□□□□ -0.8
MDC1-202ENST00000416571 NKD1Q969G9 470 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 CCDC74BQ96LY2 380 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 NUDT22Q9BRQ3 303 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 NAA15Q9BXJ9 866 aaKnown RBP10.06□□□□□ -0.8
MDC1-202ENST00000416571 SLC12A9Q9BXP2 914 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 CARS2Q9HA77 564 aaKnown RBP10.06□□□□□ -0.8
MDC1-202ENST00000416571 SDK2Q58EX2 2172 aa10.06□□□□□ -0.8
MDC1-202ENST00000416571 DOPEY2Q9Y3R5 2298 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 CREBBPQ92793 2442 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 ZFC3H1O60293 1989 aaKnown RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 IGHV5-10-1A0A0J9YXX1 117 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 ARHGAP42A6NI28 874 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 ZNF891A8MT65 544 aaPredicted RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 B4GAT1O43505 415 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 BUB1BO60566 1050 aaPredicted RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 PALMO75781 387 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 CALB1P05937 261 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 HOXC4P09017 264 aaPredicted RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 MYCLP1P12525 358 aaPredicted RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 CCNB1P14635 433 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 RFC1P35251 1148 aaPredicted RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 TRIM23P36406 574 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 AIF1P55008 147 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 TPI1P60174 286 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 RALGDSQ12967 914 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 TRA2AQ13595 282 aaKnown RBP eCLIP10.05□□□□□ -0.8
MDC1-202ENST00000416571 UBAP2LQ14157 1087 aaKnown RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 SYCP1Q15431 976 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 SKIDA1Q1XH10 827 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 DPY19L2P1Q6NXN4 242 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 WDR59Q6PJI9 974 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 LIPIQ6XZB0 460 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 DPPA4Q7L190 304 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 SRLQ86TD4 932 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 ZSWIM9Q86XI8 627 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 CACNA2D3Q8IZS8 1091 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 AGBL5Q8NDL9 886 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 ART4Q93070 314 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 CATSPER2Q96P56 530 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 CINPQ9BW66 212 aaPredicted RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 LGR4Q9BXB1 951 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 ASPSCR1Q9BZE9 553 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 CDH19Q9H159 772 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 EPN3Q9H201 632 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 PHPT1Q9NRX4 125 aaPredicted RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 SPATS2LQ9NUQ6 558 aaKnown RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 ADAM22Q9P0K1 906 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 TUBD1Q9UJT1 453 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 NOCTQ9UK39 431 aaKnown RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 PCDHGA3Q9Y5H0 932 aa10.05□□□□□ -0.8
MDC1-202ENST00000416571 ARHGEF17Q96PE2 2063 aaPredicted RBP10.05□□□□□ -0.8
MDC1-202ENST00000416571 GOLGA6CA6NDK9 693 aa10.04□□□□□ -0.8
MDC1-202ENST00000416571 GOLGA6BA6NDN3 693 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms