RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 INSIG1O15503 277 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 RRP8O43159 456 aaKnown RBP20.6■□□□□ 0.89
PTPRU-203ENST00000415600 LZTS3O60299 673 aaPredicted RBP20.6■□□□□ 0.89
PTPRU-203ENST00000415600 CXCR5P32302 372 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 PPARDQ03181 441 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 CA9Q16790 459 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 CCDC181Q5TID7 509 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 C19orf48Q6RUI8 117 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 PHACTR4Q8IZ21 702 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 HES6Q96HZ4 224 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 PBKQ96KB5 322 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 ZNF599Q96NL3 588 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 PEBP4Q96S96 227 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 PCDH12Q9NPG4 1184 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 DOLKQ9UPQ8 538 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 ATP8A1Q9Y2Q0 1164 aa20.6■□□□□ 0.89
PTPRU-203ENST00000415600 A0A1W2PQ67 120 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 OPA1O60313 960 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 SERPINB6P35237 376 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 ACTN2P35609 894 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 IGFALSP35858 605 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 HSPA9P38646 679 aaKnown RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 PAFAH1B1P43034 410 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 AP1S1P61966 158 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 SEMG2Q02383 582 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 AFMIDQ63HM1 303 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 TMCO3Q6UWJ1 677 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 FSTL5Q8N475 847 aaPredicted RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 NETO2Q8NC67 525 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 ZNF564Q8TBZ8 553 aaPredicted RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 MAPK15Q8TD08 544 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 HNRNPLLQ8WVV9 542 aaKnown RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 NAT6Q93015 286 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 NUP85Q9BW27 656 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 IP6K2Q9UHH9 426 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 A0A087WV48 116 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 NEBLO76041 1014 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 ANXA6P08133 673 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 H2AFXP16104 143 aaPredicted RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 EIF2B5Q13144 721 aaKnown RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 ZNF235Q14590 738 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 ELOCQ15369 112 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 NR0B2Q15466 257 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 DPYSL2Q16555 572 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 PRRT3Q5FWE3 981 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 ESRP1Q6NXG1 681 aaKnown RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 KDM7AQ6ZMT4 941 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 CAMK1DQ8IU85 385 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 SDR16C5Q8N3Y7 309 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 ARFGAP1Q8N6T3 406 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 TP53I13Q8NBR0 393 aaPredicted RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 NOA1Q8NC60 698 aaKnown RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 TSEN2Q8NCE0 465 aaKnown RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 IFI44Q8TCB0 444 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 VOPP1Q96AW1 172 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 GRAMD1AQ96CP6 724 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 TRIM7Q9C029 511 aa20.59■□□□□ 0.89
PTPRU-203ENST00000415600 CWC15Q9P013 229 aaKnown RBP20.59■□□□□ 0.89
PTPRU-203ENST00000415600 LMO7DNF2Z398 122 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 ALPIP09923 528 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 GIMD1P0DJR0 217 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 C6P13671 934 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 CTSEP14091 401 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 MMP12P39900 470 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 CLDN6P56747 220 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 DPYSQ14117 519 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 IRF4Q15306 451 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 COL28A1Q2UY09 1125 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 LSMEM2Q8N112 164 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 WDR48Q8TAF3 677 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 DCBLD2Q96PD2 775 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 PSKH2Q96QS6 385 aa20.58■□□□□ 0.88
PTPRU-203ENST00000415600 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.58■□□□□ 0.88
PTPRU-203ENST00000415600 RALYQ9UKM9 306 aaKnown RBP20.58■□□□□ 0.88
PTPRU-203ENST00000415600 ABCG1P45844 678 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 LIG3P49916 1009 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 SCNN1BP51168 640 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 LBRQ14739 615 aaKnown RBP20.57■□□□□ 0.88
PTPRU-203ENST00000415600 AGERQ15109 404 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 DEFB133Q30KQ1 61 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 FBXO38Q6PIJ6 1188 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 ARHGAP12Q8IWW6 846 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 TEKT4Q8WW24 435 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 HSPH1Q92598 858 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 ANKZF1Q9H8Y5 726 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 MBNL1Q9NR56 388 aaKnown RBP20.57■□□□□ 0.88
PTPRU-203ENST00000415600 HAUS2Q9NVX0 235 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 KCTD5Q9NXV2 234 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 KLF15Q9UIH9 416 aa20.57■□□□□ 0.88
PTPRU-203ENST00000415600 CPED1A4D0V7 1026 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 RASGRP1O95267 797 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 ELFN1P0C7U0 828 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 KELP23276 732 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 MTM1Q13496 603 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 CDKN3Q16667 212 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 HADHQ16836 314 aaKnown RBP20.56■□□□□ 0.88
PTPRU-203ENST00000415600 LVRNQ6Q4G3 990 aa20.56■□□□□ 0.88
PTPRU-203ENST00000415600 MTERF4Q7Z6M4 381 aaKnown RBP20.56■□□□□ 0.88
PTPRU-203ENST00000415600 PDZD3Q86UT5 571 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms