RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 DONSONQ9NYP3 566 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 FOXJ2Q9P0K8 574 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 PCSK1NQ9UHG2 260 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 SIK3Q9Y2K2 1263 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 COL6A6A6NMZ7 2263 aa19.4■□□□□ 0.7
UBXN4-202ENST00000415164 GOLGA6CA6NDK9 693 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 GOLGA6BA6NDN3 693 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 NVLO15381 856 aaKnown RBP19.39■□□□□ 0.69
UBXN4-202ENST00000415164 FAM87AP0C7U9 286 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 GOLGA6DP0CG33 693 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 PPM1FP49593 454 aaPredicted RBP19.39■□□□□ 0.69
UBXN4-202ENST00000415164 SCNN1BP51168 640 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 MAZP56270 477 aaKnown RBP19.39■□□□□ 0.69
UBXN4-202ENST00000415164 OGDHQ02218 1023 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 RALGDSQ12967 914 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 CA9Q16790 459 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 CT47A1Q5JQC4 288 aaPredicted RBP19.39■□□□□ 0.69
UBXN4-202ENST00000415164 CDKAL1Q5VV42 579 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 LIPIQ6XZB0 460 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 ARHGAP36Q6ZRI8 547 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 ANKRD20A12PQ8NF67 263 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 PDCD6IPQ8WUM4 868 aaKnown RBP19.39■□□□□ 0.69
UBXN4-202ENST00000415164 LGR4Q9BXB1 951 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 ZMYND15Q9H091 742 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 SEMA6CQ9H3T2 930 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 CARS2Q9HA77 564 aaKnown RBP19.39■□□□□ 0.69
UBXN4-202ENST00000415164 GOLGA6AQ9NYA3 693 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 CHMP5Q9NZZ3 219 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 AKAP7Q9P0M2 348 aaPredicted RBP19.39■□□□□ 0.69
UBXN4-202ENST00000415164 APPL1Q9UKG1 709 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 PIEZO2Q9H5I5 2752 aa19.39■□□□□ 0.69
UBXN4-202ENST00000415164 TTC24A2A3L6 582 aaPredicted RBP19.38■□□□□ 0.69
UBXN4-202ENST00000415164 RHPN2P1A8MT19 583 aa19.38■□□□□ 0.69
UBXN4-202ENST00000415164 ATMINO43313 823 aaPredicted RBP19.38■□□□□ 0.69
UBXN4-202ENST00000415164 ALDH4A1P30038 563 aa19.38■□□□□ 0.69
UBXN4-202ENST00000415164 POLR2LP62875 67 aaKnown RBP19.38■□□□□ 0.69
UBXN4-202ENST00000415164 CYP4F2P78329 520 aa19.38■□□□□ 0.69
UBXN4-202ENST00000415164 UBXN1Q04323 297 aa19.38■□□□□ 0.69
UBXN4-202ENST00000415164 HLTFQ14527 1009 aaKnown RBP eCLIP19.38■□□□□ 0.69
UBXN4-202ENST00000415164 AGERQ15109 404 aa19.38■□□□□ 0.69
UBXN4-202ENST00000415164 PPP6R3Q5H9R7 873 aaPredicted RBP19.38■□□□□ 0.69
UBXN4-202ENST00000415164 TMPRSS9Q7Z410 1059 aa19.38■□□□□ 0.69
UBXN4-202ENST00000415164 KIAA1524Q8TCG1 905 aa19.38■□□□□ 0.69
UBXN4-202ENST00000415164 TCRBV5S1A1TA0A578 114 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 PRSS38A1L453 326 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 ARHGAP6O43182 974 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 OR1D5P58170 312 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 ZFP36L1Q07352 338 aaKnown RBP19.37■□□□□ 0.69
UBXN4-202ENST00000415164 ACAD10Q6JQN1 1059 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 PNCKQ6P2M8 343 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 OGFOD3Q6PK18 319 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 DPPA4Q7L190 304 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 PIM3Q86V86 326 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 MCOLN2Q8IZK6 566 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 PELI3Q8N2H9 469 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 ZDHHC1Q8WTX9 485 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 TMEM159Q96B96 161 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 NUS1Q96E22 293 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 KCTD15Q96SI1 283 aaPredicted RBP19.37■□□□□ 0.69
UBXN4-202ENST00000415164 SNRNP25Q9BV90 132 aaKnown RBP19.37■□□□□ 0.69
UBXN4-202ENST00000415164 B4GALT6Q9UBX8 382 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 ACSL6Q9UKU0 697 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 PCDHGA4Q9Y5G9 962 aa19.37■□□□□ 0.69
UBXN4-202ENST00000415164 LRRK1Q38SD2 2015 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 ANKRD36A6QL64 1941 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 CFAP69A5D8W1 941 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 NUDT21O43809 227 aaKnown RBP19.36■□□□□ 0.69
UBXN4-202ENST00000415164 PNLIPP16233 465 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 ERCC2P18074 760 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 CDK11BP21127 795 aaKnown RBP19.36■□□□□ 0.69
UBXN4-202ENST00000415164 HTR7P34969 479 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 GNPDA1P46926 289 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 CSNK1DP48730 415 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 C16orf72Q14CZ0 275 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 TSR1Q2NL82 804 aaKnown RBP19.36■□□□□ 0.69
UBXN4-202ENST00000415164 PPP1R15BQ5SWA1 713 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 TMEM164Q5U3C3 297 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 RFX8Q6ZV50 586 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 SLITRK4Q8IW52 837 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 RCBTB1Q8NDN9 531 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 SPATS2LQ9NUQ6 558 aaKnown RBP19.36■□□□□ 0.69
UBXN4-202ENST00000415164 TAS2R14Q9NYV8 317 aa19.36■□□□□ 0.69
UBXN4-202ENST00000415164 LRP4O75096 1905 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 C9orf172C9J069 976 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 PDE2AO00408 941 aaPredicted RBP19.35■□□□□ 0.69
UBXN4-202ENST00000415164 TNFRSF10CO14798 259 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 TNFAIP3P21580 790 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 ILF3Q12906 894 aaKnown RBP eCLIP19.35■□□□□ 0.69
UBXN4-202ENST00000415164 ZNF235Q14590 738 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 ERMARDQ5T6L9 678 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 AFMIDQ63HM1 303 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 DOK6Q6PKX4 331 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 SLC30A9Q6PML9 568 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 HEATR4Q86WZ0 1026 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 ECHDC3Q96DC8 303 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 NUDT22Q9BRQ3 303 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 GSDMCQ9BYG8 508 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 PHPT1Q9NRX4 125 aaPredicted RBP19.35■□□□□ 0.69
UBXN4-202ENST00000415164 SEPT3Q9UH03 358 aa19.35■□□□□ 0.69
UBXN4-202ENST00000415164 PCDHGC4Q9Y5F7 938 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms