RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 HLA-DQA1Q5Y7H0 255 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 CCDC185Q8N715 623 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 SETD9Q8NE22 299 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 DTNBP1Q96EV8 351 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 C6orf203Q9P0P8 240 aaPredicted RBP11.99□□□□□ -0.49
PTPRF-205ENST00000414879 MTF2Q9Y483 593 aaPredicted RBP11.99□□□□□ -0.49
PTPRF-205ENST00000414879 DNAJC25-GNG10A0A024R161 153 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 TCEA3O75764 348 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 KRT75O95678 551 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 ZNF23P17027 643 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 RGS1Q08116 209 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 CYTH1Q15438 398 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 TSTD2Q5T7W7 516 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 TTC33Q6PID6 262 aaPredicted RBP11.99□□□□□ -0.49
PTPRF-205ENST00000414879 C17orf99Q6UX52 265 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 MARK2Q7KZI7 788 aaKnown RBP11.99□□□□□ -0.49
PTPRF-205ENST00000414879 PHYKPLQ8IUZ5 450 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 ZNF567Q8N184 647 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 CCDC28BQ9BUN5 200 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 DZANK1Q9NVP4 752 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 ZFP37Q9Y6Q3 630 aaPredicted RBP11.99□□□□□ -0.49
PTPRF-205ENST00000414879 IRS2Q9Y4H2 1338 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 RGSL1A5PLK6 1076 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 CCL16O15467 120 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 SNRPB2P08579 225 aaKnown RBP11.99□□□□□ -0.49
PTPRF-205ENST00000414879 SERPINB3P29508 390 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 MAXP61244 160 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 PRKG2Q13237 762 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 AP1ARQ63HQ0 302 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 LRRN4CLQ8ND94 238 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 PCDH19Q8TAB3 1148 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 PCYT2Q99447 389 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 FAM83DQ9H4H8 585 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 R3HDM2Q9Y2K5 976 aaKnown RBP11.99□□□□□ -0.49
PTPRF-205ENST00000414879 A0A0U1RQJ8 604 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 LRRC72A6NJI9 287 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 LDLRP01130 860 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 APOA1P02647 267 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 SOD2P04179 222 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 BPGMP07738 259 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 PEX19P40855 299 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 BST1Q10588 318 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 CAPN13Q6MZZ7 669 aaPredicted RBP11.99□□□□□ -0.49
PTPRF-205ENST00000414879 DOK6Q6PKX4 331 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 ZNF783Q6ZMS7 281 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 RNF168Q8IYW5 571 aaPredicted RBP11.99□□□□□ -0.49
PTPRF-205ENST00000414879 EID3Q8N140 333 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 HHIPL1Q96JK4 782 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 KLQ9UEF7 1012 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 PLLPQ9Y342 182 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 MYH7P12883 1935 aa11.99□□□□□ -0.49
PTPRF-205ENST00000414879 SHBGP04278 402 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 DGKGP49619 791 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 RPL26P61254 145 aaKnown RBP11.98□□□□□ -0.49
PTPRF-205ENST00000414879 ACAP2Q15057 778 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 LSM12Q3MHD2 195 aaKnown RBP11.98□□□□□ -0.49
PTPRF-205ENST00000414879 ZNF461Q8TAF7 563 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 KLHL5Q96PQ7 755 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 ERVK-5Q9HDB9 667 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 XPR1Q9UBH6 696 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 RPS6KA6Q9UK32 745 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 PRPF19Q9UMS4 504 aaKnown RBP11.98□□□□□ -0.49
PTPRF-205ENST00000414879 BAZ2AQ9UIF9 1905 aaKnown RBP11.98□□□□□ -0.49
PTPRF-205ENST00000414879 HAPLN1P10915 354 aaPredicted RBP11.98□□□□□ -0.49
PTPRF-205ENST00000414879 PSMC3P17980 439 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 PTGIRP43119 386 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 SMIM11AP58511 58 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 SPIDRQ14159 915 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 MFSD4BQ5TF39 518 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 RD3Q7Z3Z2 195 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 RAVER1Q8IY67 606 aaKnown RBP11.98□□□□□ -0.49
PTPRF-205ENST00000414879 GLMNQ92990 594 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 LINGO1Q96FE5 620 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 C9orf16Q9BUW7 83 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 PCBD2Q9H0N5 130 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 RAB23Q9ULC3 237 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 CHKBQ9Y259 395 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 LY75O60449 1722 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 C4AP0C0L4 1744 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 CCND3P30281 292 aaPredicted RBP11.98□□□□□ -0.49
PTPRF-205ENST00000414879 CXCR3P49682 368 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 PKNOX1P55347 436 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 GALNT3Q14435 633 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 TBCELQ5QJ74 424 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 DNAJB7Q7Z6W7 309 aaPredicted RBP11.98□□□□□ -0.49
PTPRF-205ENST00000414879 SNX32Q86XE0 403 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 KCTD4Q8WVF5 259 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 C7orf26Q96N11 449 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 SEMA4BQ9NPR2 832 aaPredicted RBP11.98□□□□□ -0.49
PTPRF-205ENST00000414879 DTLQ9NZJ0 730 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 SNX13Q9Y5W8 968 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 SAC3D1A6NKF1 404 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 PFDN1O60925 122 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 C2P06681 752 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 COX7A2P14406 83 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 PIK3R1P27986 724 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 RANBP1P43487 201 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 GPM6BQ13491 265 aa11.98□□□□□ -0.49
PTPRF-205ENST00000414879 LPIN1Q14693 890 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms