RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 GOLGA6L19H0YKK7 550 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 CACNB4O00305 520 aaPredicted RBP15.59■□□□□ 0.09
ACTB-202ENST00000414620 MAFKO60675 156 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 CD48P09326 243 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 CR2P20023 1033 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 LSSP48449 732 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 PDX1P52945 283 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 CDH6P55285 790 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 KIAA1024LP59773 190 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 POLR2LP62875 67 aaKnown RBP15.59■□□□□ 0.09
ACTB-202ENST00000414620 CXADRP78310 365 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 ZBED6P86452 979 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 TRAF2Q12933 501 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 SPIDRQ14159 915 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 PTPRRQ15256 657 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 CNGA3Q16281 694 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 SFTPA2Q8IWL1 248 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 SDR16C5Q8N3Y7 309 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 ZNF248Q8NDW4 579 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 OR56A4Q8NGH8 313 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 SCG3Q8WXD2 468 aaKnown RBP15.59■□□□□ 0.09
ACTB-202ENST00000414620 NUS1Q96E22 293 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 ZNF578Q96N58 590 aaPredicted RBP15.59■□□□□ 0.09
ACTB-202ENST00000414620 NUDCD1Q96RS6 583 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 LGR4Q9BXB1 951 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 NOD2Q9HC29 1040 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 ASCL3Q9NQ33 180 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 IFNKQ9P0W0 207 aa15.59■□□□□ 0.09
ACTB-202ENST00000414620 BZW2Q9Y6E2 419 aaKnown RBP15.59■□□□□ 0.09
ACTB-202ENST00000414620 GOLGA6CA6NDK9 693 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 GOLGA6BA6NDN3 693 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 EIF4E1BA6NMX2 242 aaKnown RBP15.58■□□□□ 0.08
ACTB-202ENST00000414620 MFSD11O43934 449 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 MAP3K6O95382 1288 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 GYPCP04921 128 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 CYP1A2P05177 515 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 GOLGA6DP0CG33 693 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 VIPR1P32241 457 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 SERPINB6P35237 376 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 MMP13P45452 471 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 TLE3Q04726 772 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 CCDC122Q5T0U0 273 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 TAF8Q7Z7C8 310 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 LSMEM2Q8N112 164 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 BBS5Q8N3I7 341 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 NIPA2Q8N8Q9 360 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 CCL4L1Q8NHW4 92 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 TPCN2Q8NHX9 752 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 NSMCE1Q8WV22 266 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 TEKT4Q8WW24 435 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 SYN2Q92777 582 aaPredicted RBP15.58■□□□□ 0.08
ACTB-202ENST00000414620 RBM15Q96T37 977 aaKnown RBP eCLIP15.58■□□□□ 0.083e-13■□□□□ 8.7
ACTB-202ENST00000414620 MGME1Q9BQP7 344 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 WDR26Q9H7D7 661 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 CYP4F12Q9HCS2 524 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 NT5MQ9NPB1 228 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 GOLGA6AQ9NYA3 693 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 CAPN11Q9UMQ6 739 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 PTPRQQ9UMZ3 2332 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 ITPR1Q14643 2758 aa15.58■□□□□ 0.08
ACTB-202ENST00000414620 A0A0U1RQS6 177 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 B4DGG1 531 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 AGRPO00253 132 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 HTRA2O43464 458 aaPredicted RBP15.57■□□□□ 0.08
ACTB-202ENST00000414620 SOCS5O75159 536 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 TCEA3O75764 348 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 DXOO77932 396 aaKnown RBP15.57■□□□□ 0.08
ACTB-202ENST00000414620 RPLP0P05388 317 aaKnown RBP15.57■□□□□ 0.08
ACTB-202ENST00000414620 CTPS1P17812 591 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 LHCGRP22888 699 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 RBMS1P29558 406 aaKnown RBP15.57■□□□□ 0.08
ACTB-202ENST00000414620 HSPA9P38646 679 aaKnown RBP15.57■□□□□ 0.08
ACTB-202ENST00000414620 CCL7P80098 99 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 ITKQ08881 620 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 ATP13A4Q4VNC1 1196 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 MARC1Q5VT66 337 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 PNCKQ6P2M8 343 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 ALKBH5Q6P6C2 394 aaKnown RBP15.57■□□□□ 0.08
ACTB-202ENST00000414620 LVRNQ6Q4G3 990 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 TSPAN33Q86UF1 283 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.57■□□□□ 0.08
ACTB-202ENST00000414620 ZNF564Q8TBZ8 553 aaPredicted RBP15.57■□□□□ 0.08
ACTB-202ENST00000414620 LRRN4Q8WUT4 740 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 KCNE4Q8WWG9 221 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 HIC2Q96JB3 615 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 COQ10AQ96MF6 247 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 UBL7Q96S82 380 aaPredicted RBP15.57■□□□□ 0.08
ACTB-202ENST00000414620 TMEM168Q9H0V1 697 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 THSD1Q9NS62 852 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 LUC7L2Q9Y383 392 aaKnown RBP15.57■□□□□ 0.08
ACTB-202ENST00000414620 DGKBQ9Y6T7 804 aa15.57■□□□□ 0.08
ACTB-202ENST00000414620 NPIPB15A6NHN6 443 aaPredicted RBP15.56■□□□□ 0.08
ACTB-202ENST00000414620 MYO1FO00160 1098 aa15.56■□□□□ 0.08
ACTB-202ENST00000414620 NTN3O00634 580 aaPredicted RBP15.56■□□□□ 0.08
ACTB-202ENST00000414620 HEXIM1O94992 359 aaKnown RBP15.56■□□□□ 0.08
ACTB-202ENST00000414620 PRB1P04280 392 aa15.56■□□□□ 0.08
ACTB-202ENST00000414620 CYP2A6P11509 494 aaPredicted RBP15.56■□□□□ 0.08
ACTB-202ENST00000414620 KELP23276 732 aa15.56■□□□□ 0.08
ACTB-202ENST00000414620 CASP14P31944 242 aa15.56■□□□□ 0.08
ACTB-202ENST00000414620 HADHQ16836 314 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms