RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 TPP1O14773 563 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 SMAD6O43541 496 aaKnown RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 TIMM44O43615 452 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 NFATC1O95644 943 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 NDST3O95803 873 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 ATXN1LP0C7T5 689 aaKnown RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 ALADP13716 330 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 TYK2P29597 1187 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 FOXN2P32314 431 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 CCNFP41002 786 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 STK19P49842 368 aaPredicted RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 RHOAP61586 193 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 SLC14A2Q15849 920 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 QPCTQ16769 361 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 UGP2Q16851 508 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 PLEKHG6Q3KR16 790 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 INO80DQ53TQ3 878 aaPredicted RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 PITRM1Q5JRX3 1037 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 TSTD2Q5T7W7 516 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 KIAA0930Q6ICG6 404 aaPredicted RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 RETSATQ6NUM9 610 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 YAF2Q8IY57 180 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 DCAF4L2Q8NA75 395 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 BLOC1S5Q8TDH9 187 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 RMDN1Q96DB5 314 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 MYO19Q96H55 970 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 NUDCD1Q96RS6 583 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 FAM167BQ9BTA0 163 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 TREX1Q9NSU2 369 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 FGFR1OP2Q9NVK5 253 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 THEGQ9P2T0 379 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 CHKBQ9Y259 395 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 TTC28Q96AY4 2481 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 MUC22E2RYF6 1773 aaPredicted RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 ZNF821O75541 412 aaPredicted RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 PAPSS2O95340 614 aaPredicted RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 TAC1P20366 129 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 ABCG1P45844 678 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 SERPINB8P50452 374 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 LIMK2P53671 638 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 KDSRQ06136 332 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 SF3A3Q12874 501 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 PDK4Q16654 411 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 ITPRIPL2Q3MIP1 535 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 MFSD4BQ5TF39 518 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 ADHFE1Q8IWW8 467 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 CACNA2D3Q8IZS8 1091 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 DCLK2Q8N568 766 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 LSM14AQ8ND56 463 aaKnown RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 RPL10LQ96L21 214 aaKnown RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 ELAC2Q9BQ52 826 aaKnown RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 SLX1AQ9BQ83 275 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 MTG2Q9H4K7 406 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 SLCO3A1Q9UIG8 710 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 GGA2Q9UJY4 613 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 GRID1Q9ULK0 1009 aa11.33□□□□□ -0.6
LINC00330-201ENST00000414562 MTO1Q9Y2Z2 717 aaKnown RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 ARIH1Q9Y4X5 557 aaPredicted RBP11.33□□□□□ -0.6
LINC00330-201ENST00000414562 ADH1CP00326 375 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 ALDOAP04075 364 aaKnown RBP11.32□□□□□ -0.6
LINC00330-201ENST00000414562 F7P08709 466 aaPredicted RBP11.32□□□□□ -0.6
LINC00330-201ENST00000414562 PIRTP0C851 137 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 PABPC1P11940 636 aaKnown RBP11.32□□□□□ -0.6
LINC00330-201ENST00000414562 CD72P21854 359 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 CRHR1P34998 444 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 ARCN1P48444 511 aaKnown RBP11.32□□□□□ -0.6
LINC00330-201ENST00000414562 GALK1P51570 392 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 PLK1P53350 603 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 PTPRNQ16849 979 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 ZNF470Q6ECI4 717 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 FSTL4Q6MZW2 842 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 NEPROQ6NW34 567 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 MICALCLQ6ZW33 695 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 OR6P1Q8NGX9 317 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 CALML6Q8TD86 181 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 CYB5D2Q8WUJ1 264 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 PDCD6IPQ8WUM4 868 aaKnown RBP11.32□□□□□ -0.6
LINC00330-201ENST00000414562 SEC16BQ96JE7 1060 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 MRGPRX3Q96LB0 322 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 ADGRE3Q9BY15 652 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 IRF2BPLQ9H1B7 796 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 VPS11Q9H270 941 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 IRAK4Q9NWZ3 460 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 MKS1Q9NXB0 559 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC00330-201ENST00000414562 FCF1Q9Y324 198 aaKnown RBP11.32□□□□□ -0.6
LINC00330-201ENST00000414562 PLLPQ9Y342 182 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 RAI2Q9Y5P3 530 aa11.32□□□□□ -0.6
LINC00330-201ENST00000414562 CR2P20023 1033 aa11.31□□□□□ -0.6
LINC00330-201ENST00000414562 SAT1P21673 171 aa11.31□□□□□ -0.6
LINC00330-201ENST00000414562 HADHAP40939 763 aa11.31□□□□□ -0.6
LINC00330-201ENST00000414562 DGKGP49619 791 aa11.31□□□□□ -0.6
LINC00330-201ENST00000414562 HNRNPH2P55795 449 aaKnown RBP11.31□□□□□ -0.6
LINC00330-201ENST00000414562 PRAMEP78395 509 aa11.31□□□□□ -0.6
LINC00330-201ENST00000414562 NSUN2Q08J23 767 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC00330-201ENST00000414562 CTBP1Q13363 440 aa11.31□□□□□ -0.6
LINC00330-201ENST00000414562 ATXN7L2Q5T6C5 722 aaPredicted RBP11.31□□□□□ -0.6
LINC00330-201ENST00000414562 CDHR3Q6ZTQ4 885 aa11.31□□□□□ -0.6
LINC00330-201ENST00000414562 FAM47EQ6ZV65 393 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms