RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 FTH1P19P0C7X4 201 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 CKMT1AP12532 417 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 C6P13671 934 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 CTSEP14091 401 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 TCF4P15884 667 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 JUNDP17535 347 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 CTNNA2P26232 953 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 STIP1P31948 543 aaKnown RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 GKP32189 559 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 CTNNA1P35221 906 aaKnown RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 MLLT3P42568 568 aaPredicted RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 HK3P52790 923 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 NAP1L1P55209 391 aaKnown RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 PDE1BQ01064 536 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 ITKQ08881 620 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 MMRN1Q13201 1228 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 PDE1CQ14123 709 aaPredicted RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 FGL2Q14314 439 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 FZD2Q14332 565 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 NFATC4Q14934 902 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 SHBQ15464 509 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 SMAD1Q15797 465 aaKnown RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 WSCD2Q2TBF2 565 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 POM121L1PQ3SYA9 428 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 FAXCQ5TGI0 409 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 SEL1L3Q68CR1 1132 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 PNCKQ6P2M8 343 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 LEKR1Q6ZMV7 388 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 SPOCD1Q6ZMY3 1216 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 BBS12Q6ZW61 710 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 KIAA1328Q86T90 577 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 GKN2Q86XP6 184 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 RFX6Q8HWS3 928 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 LSMEM2Q8N112 164 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 SLC25A45Q8N413 288 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 PDCD7Q8N8D1 485 aaKnown RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 KDF1Q8NAX2 398 aaPredicted RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 AVL9Q8NBF6 648 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 OR13H1Q8NG92 308 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 OR6K2Q8NGY2 324 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 PIH1D2Q8WWB5 315 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 RAPGEF5Q92565 580 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 NAT6Q93015 286 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 CNDP2Q96KP4 475 aaKnown RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 TEKT5Q96M29 485 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 COQ10AQ96MF6 247 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 WDR92Q96MX6 357 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 OLFM3Q96PB7 478 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 TEX101Q9BY14 249 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 NRSN2Q9GZP1 204 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 IL21RQ9HBE5 538 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 PCDH9Q9HC56 1237 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 NT5MQ9NPB1 228 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 PHPT1Q9NRX4 125 aaPredicted RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 TRNAU1APQ9NX07 287 aaKnown RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 NFKBIL1Q9UBC1 381 aaPredicted RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 FEZ2Q9UHY8 353 aaPredicted RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 AAR2Q9Y312 384 aaKnown RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 PCDHGC4Q9Y5F7 938 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 HEY1Q9Y5J3 304 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 RAI2Q9Y5P3 530 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 ACTL7AQ9Y615 435 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 CEP250Q9BV73 2442 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 CACNA1AO00555 2505 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 TDRD6O60522 2096 aaKnown RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 DMDP11532 3685 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 EME2A4GXA9 379 aaPredicted RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 GOLGA6CA6NDK9 693 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 GOLGA6BA6NDN3 693 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 MUSKO15146 869 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 MFSD11O43934 449 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 TCEA3O75764 348 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 PIGNO95427 931 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 JCHAINP01591 159 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 KRT1P04264 644 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 PROS1P07225 676 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 GOLGA6DP0CG33 693 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 MYCLP1P12525 358 aaPredicted RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 PRLRP16471 622 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 RGRP47804 291 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 NUMBP49757 651 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 SRP54P61011 504 aaKnown RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 GBE1Q04446 702 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 CDK18Q07002 472 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 AP1B1Q10567 949 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 SLC10A2Q12908 348 aaPredicted RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 BNIP3Q12983 259 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 MPP3Q13368 585 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 LAMB3Q13751 1172 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 LRP8Q14114 963 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 PRPSAP1Q14558 356 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 INPP5AQ14642 412 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 ACOX1Q15067 660 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 PROX2Q3B8N5 592 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 ITPRIPL1Q6GPH6 555 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 MFSD7Q6UXD7 560 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 C4orf22Q6V702 233 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 CCNI2Q6ZMN8 369 aaPredicted RBP6.4□□□□□ -1.38
USP54-202ENST00000413442 ARHGAP36Q6ZRI8 547 aa6.4□□□□□ -1.38
USP54-202ENST00000413442 PID1Q7Z2X4 250 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms