RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 CCSER2Q9H7U1 834 aa13.08□□□□□ -0.32
LITAF-203ENST00000413364 THAP1Q9NVV9 213 aa13.08□□□□□ -0.32
LITAF-203ENST00000413364 SAGE1Q9NXZ1 904 aa13.08□□□□□ -0.32
LITAF-203ENST00000413364 MTRRQ9UBK8 725 aa13.08□□□□□ -0.32
LITAF-203ENST00000413364 OGDHLQ9ULD0 1010 aa13.08□□□□□ -0.32
LITAF-203ENST00000413364 FNDC1Q4ZHG4 1894 aaPredicted RBP13.07□□□□□ -0.32
LITAF-203ENST00000413364 GREB1Q4ZG55 1949 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 NOTOA8MTQ0 251 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 J3KR12 359 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 ADAM12O43184 909 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 MYCP01106 439 aaPredicted RBP13.07□□□□□ -0.32
LITAF-203ENST00000413364 MYL2P10916 166 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 UBL4AP11441 157 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 FGF3P11487 239 aaPredicted RBP13.07□□□□□ -0.32
LITAF-203ENST00000413364 NUP107P57740 925 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 PCLAFQ15004 111 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 MARC1Q5VT66 337 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 ANKRD33Q7Z3H0 272 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 NET1Q7Z628 596 aaPredicted RBP13.07□□□□□ -0.32
LITAF-203ENST00000413364 TEX26Q8N6G2 289 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 RPRD1AQ96P16 312 aaPredicted RBP13.07□□□□□ -0.32
LITAF-203ENST00000413364 CDK5RAP1Q96SZ6 601 aaKnown RBP13.07□□□□□ -0.32
LITAF-203ENST00000413364 ZNF395Q9H8N7 513 aaPredicted RBP13.07□□□□□ -0.32
LITAF-203ENST00000413364 SP110Q9HB58 689 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 NT5MQ9NPB1 228 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 TMEM216Q9P0N5 145 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 SLC30A1Q9Y6M5 507 aa13.07□□□□□ -0.32
LITAF-203ENST00000413364 TANC1Q9C0D5 1861 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 CCDC78A2IDD5 438 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 GOLGA8CPA6NN73 597 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 TFAP2AP05549 437 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 F7P08709 466 aaPredicted RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 CCDC159P0C7I6 412 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 HMOX2P30519 316 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ABCG1P45844 678 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 GSSP48637 474 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ALDH7A1P49419 539 aaKnown RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 PARP15Q460N3 678 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 NADSYN1Q6IA69 706 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ZCCHC23Q6ZST2 131 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 NEK10Q6ZWH5 1172 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 CLEC14AQ86T13 490 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ZC3HC1Q86WB0 502 aaKnown RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 CNTN4Q8IWV2 1026 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 LSMEM2Q8N112 164 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 MYO1HQ8N1T3 1032 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 GOLM1Q8NBJ4 401 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 PSMG2Q969U7 264 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 MED30Q96HR3 178 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 GPR22Q99680 433 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 C20orf27Q9GZN8 174 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 RHOJQ9H4E5 214 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ARNT2Q9HBZ2 717 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 VPS45Q9NRW7 570 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 CRNNQ9UBG3 495 aaPredicted RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 BACE2Q9Y5Z0 518 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 SCN5AQ14524 2016 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 DOCK4Q8N1I0 1966 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 A0A096LPK6 155 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 PFDN6O15212 129 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 RAMP2O60895 175 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 CLASP2O75122 1294 aaKnown RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 HAUS5O94927 633 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 PGM3O95394 542 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 SERPINE1P05121 402 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ARCN1P48444 511 aaKnown RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 MAPKAPK2P49137 400 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 RAP1GDS1P52306 607 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ATN1P54259 1190 aaPredicted RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 ZBTB16Q05516 673 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 IL10RBQ08334 325 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 SLC10A7Q0GE19 358 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 THOC5Q13769 683 aaKnown RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 POLD3Q15054 466 aaPredicted RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 PDK3Q15120 406 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 USP41Q3LFD5 358 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 NADK2Q4G0N4 442 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ESRP1Q6NXG1 681 aaKnown RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 TTC23LQ6PF05 361 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 DEFB128Q7Z7B8 93 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ARID3BQ8IVW6 561 aaPredicted RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 OR7G1Q8NGA0 311 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 PABPC5Q96DU9 382 aaKnown RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 MAELQ96JY0 434 aaKnown RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 KLHL5Q96PQ7 755 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 GPATCH1Q9BRR8 931 aaKnown RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 CAB39LQ9H9S4 337 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 GPAMQ9HCL2 828 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ATP13A1Q9HD20 1204 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 FKBP14Q9NWM8 211 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 C6orf203Q9P0P8 240 aaPredicted RBP13.06□□□□□ -0.32
LITAF-203ENST00000413364 COPG2Q9UBF2 871 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 WASF2Q9Y6W5 498 aa13.06□□□□□ -0.32
LITAF-203ENST00000413364 ANKRD34BA5PLL1 514 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 C2orf71A6NGG8 1288 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 SIN3BO75182 1162 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 FKBP6O75344 327 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 VAPBO95292 243 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 ESRRBO95718 433 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 C2P06681 752 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms