RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ZC3H12CQ9C0D7 883 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 GANQ9H2C0 597 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 CDC42EP4Q9H3Q1 356 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 POLE4Q9NR33 117 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 HPF1Q9NWY4 346 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 B3GNT2Q9NY97 397 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 NPAP1Q9NZP6 1156 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 TMEM9Q9P0T7 183 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PXDNQ92626 1479 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 FAM155AB1AL88 458 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 PPEF1O14829 653 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 SORBS3O60504 671 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 H6PDO95479 791 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 WDPCPO95876 746 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 UGT2B4P06133 528 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 CD46P15529 392 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SLC7A2P52569 658 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 EIF6P56537 245 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 CDKL1Q00532 357 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 NPY5RQ15761 445 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 IL17AQ16552 155 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 C1orf185Q5T7R7 199 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 IRAK1BP1Q5VVH5 260 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 TFAP2EQ6VUC0 442 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 GADL1Q6ZQY3 521 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 LRRC55Q6ZSA7 311 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 CHST3Q7LGC8 479 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 EPHX4Q8IUS5 362 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 NIPA2Q8N8Q9 360 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 FBXO15Q8NCQ5 510 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 OR2T34Q8NGX1 318 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 DNAJB8Q8NHS0 232 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 HUS1BQ8NHY5 278 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 FBXO27Q8NI29 283 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 OLIG1Q8TAK6 271 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ADAMTS19Q8TE59 1207 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SLC10A4Q96EP9 437 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PRR11Q96HE9 360 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 CLPTM1LQ96KA5 538 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ZBTB18Q99592 522 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ACTR6Q9GZN1 396 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 NAA50Q9GZZ1 169 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 C20orf96Q9NUD7 363 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 MFHAS1Q9Y4C4 1052 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 HSPE1-MOB4S4R3N1 261 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 A0A087X0T9 212 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 TRABD2BA6NFA1 517 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ARHGAP42A6NI28 874 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 CENPXA8MT69 81 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PLD2O14939 933 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 GPAA1O43292 621 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SMPD2O60906 423 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PRKRAO75569 313 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 TOM1L1O75674 476 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 TRIM16O95361 564 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ANXA6P08133 673 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PRG2P13727 222 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 TNNI1P19237 187 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 IMPDH1P20839 514 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SSTR3P32745 418 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 EPHX2P34913 555 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ETV5P41161 510 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 STAT1P42224 750 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 TM4SF4P48230 202 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ATXN1P54253 815 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 PSMC6P62333 389 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SLC3A1Q07837 685 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 INCA1Q0VD86 236 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 CCNIQ14094 377 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ZFP69Q49AA0 526 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ZYG11AQ6WRX3 759 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 FRMD5Q7Z6J6 570 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ZFPM1Q8IX07 1006 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 TRIM22Q8IYM9 498 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SLC25A41Q8N5S1 370 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ZNF321PQ8N8H1 164 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 ZNF248Q8NDW4 579 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 OR9A1PQ8NGU1 263 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 SHISA4Q96DD7 197 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PGAP3Q96FM1 320 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 DUS3LQ96G46 650 aaKnown RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 MAGED4Q96JG8 741 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 VRK1Q99986 396 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 TCF25Q9BQ70 676 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 PI4K2AQ9BTU6 479 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 BLZF1Q9H2G9 400 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 UXTQ9UBK9 157 aaPredicted RBP5.25□□□□□ -1.57
HERC4-205ENST00000412272 GLI3P10071 1580 aa5.25□□□□□ -1.57
HERC4-205ENST00000412272 WASLO00401 505 aaPredicted RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 DCLK1O15075 740 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 LDLRAD4O15165 306 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 PCDHGA12O60330 932 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 LILRB5O75023 590 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CPOXP36551 454 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 CSKP41240 450 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 AKR1D1P51857 326 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 DCDC1P59894 354 aa5.24□□□□□ -1.57
HERC4-205ENST00000412272 RPL10AP62906 217 aaKnown RBP5.24□□□□□ -1.57
HERC4-205ENST00000412272 BTN1A1Q13410 526 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms