RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 RPIAP49247 311 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 KIAA1024LP59773 190 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 MAXP61244 160 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 NSUN2Q08J23 767 aaKnown RBP eCLIP16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 TRAF2Q12933 501 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 CLN3Q13286 438 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 SPIDRQ14159 915 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 LVRNQ6Q4G3 990 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 POLNQ7Z5Q5 900 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 CLEC14AQ86T13 490 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 NRROSQ86YC3 692 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 CBARPQ8N350 705 aaPredicted RBP16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 TTC9Q92623 222 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 GLMNQ92990 594 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 ZWILCHQ9H900 591 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 DOLKQ9UPQ8 538 aa16.55■□□□□ 0.24
SCAMP4-203ENST00000411971 CCDC187A0A096LP49 1063 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 A0A1W2PQC6 194 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 CFAP69A5D8W1 941 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 EIF3CLB5ME19 914 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 D6RAR5 112 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 TK2O00142 265 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 HTRA2O43464 458 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 RNF8O76064 485 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 TNFP01375 233 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 RPLP0P05388 317 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 ALPIP09923 528 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 ELFN1P0C7U0 828 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 CCDC172P0C7W6 258 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 RARAP10276 462 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 HTR1BP28222 390 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 BLKP51451 505 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 TMPRSS3P57727 454 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 KLHL30Q0D2K2 578 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 NR1I3Q14994 352 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 DPYSL2Q16555 572 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 FAM182AQ5T1J6 154 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 CFAP58Q5T655 872 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 TMCO4Q5TGY1 634 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 KIAA1614Q5VZ46 1190 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 OGFOD3Q6PK18 319 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 HSD11B1LQ7Z5J1 315 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 TSPAN33Q86UF1 283 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 Q8N9G6 341 aaPredicted RBP16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 OR56A4Q8NGH8 313 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 WDR36Q8NI36 951 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 HSPH1Q92598 858 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 CSPG4P5Q96PW8 444 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 EIF3CQ99613 913 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 NOD2Q9HC29 1040 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 EPB41L5Q9HCM4 733 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 CYP4F12Q9HCS2 524 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 SPATS2LQ9NUQ6 558 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 RNF215Q9Y6U7 377 aa16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 SETXQ7Z333 2677 aaKnown RBP16.54■□□□□ 0.24
SCAMP4-203ENST00000411971 BSNQ9UPA5 3926 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 MBD3O95983 291 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 CD48P09326 243 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 IL4RP24394 825 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 RBMS1P29558 406 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 UGT1A5P35504 534 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 PBX1P40424 430 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 ETV5P41161 510 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 SLC25A11Q02978 314 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 MMRN1Q13201 1228 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 LY6DQ14210 128 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 RFTN1Q14699 578 aaPredicted RBP16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 ACOX1Q15067 660 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 TGIF1Q15583 401 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 PNCKQ6P2M8 343 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 GKN2Q86XP6 184 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 PSTKQ8IV42 348 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 LRRN4Q8WUT4 740 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 SNRNP27Q8WVK2 155 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 LIN37Q96GY3 246 aaPredicted RBP16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 GFM1Q96RP9 751 aaKnown RBP16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 LRRN3Q9H3W5 708 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 SUDS3Q9H7L9 328 aaPredicted RBP16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 PCDH18Q9HCL0 1135 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 SEPT3Q9UH03 358 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 SDK2Q58EX2 2172 aa16.53■□□□□ 0.24
SCAMP4-203ENST00000411971 NPIPB15A6NHN6 443 aaPredicted RBP16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 B4DGG1 531 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 HEXIM1O94992 359 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 PDHA1P08559 390 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 ITIH1P19827 911 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 PCK1P35558 622 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 ETV3P41162 512 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 POLD2P49005 469 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 MAZP56270 477 aaKnown RBP16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 AP1S1P61966 158 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 VAC14Q08AM6 782 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 C19orf57Q0VDD7 668 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 HLTFQ14527 1009 aaKnown RBP eCLIP16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 ATP13A4Q4VNC1 1196 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 DENND2CQ68D51 928 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 TAF8Q7Z7C8 310 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 FAM46DQ8NEK8 389 aa16.52■□□□□ 0.24
SCAMP4-203ENST00000411971 PATE1Q8WXA2 126 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms