RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 OR5M3Q8NGP4 307 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 ZCCHC10Q8TBK6 192 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 GTF3C4Q9UKN8 822 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 MROH2AA6NES4 1674 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 TMEM88BA6NKF7 163 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 CXCL11O14625 94 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 PHGDHO43175 533 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 CABYRO75952 493 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 FSBPO95073 299 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 DDX6P26196 483 aaKnown RBP eCLIP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 SHMT1P34896 483 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 FRG1Q14331 258 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 C9orf64Q5T6V5 341 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 SETD9Q8NE22 299 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 BPIFB6Q8NFQ5 453 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 COPS5Q92905 334 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 LOC102724159A0A0B4J2E5 919 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 SLC31A1O15431 190 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 IFNGP01579 166 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 TOB1P50616 345 aaPredicted RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 TROAPQ12815 778 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 PWP2Q15269 919 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 ZIK1Q3SY52 487 aaPredicted RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 MZT2BQ6NZ67 158 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 WDR93Q6P2C0 686 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 VANGL1Q8TAA9 524 aaPredicted RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 CD99L2Q8TCZ2 262 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 MYLPFQ96A32 169 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 MTMR9Q96QG7 549 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 RPS6KA6Q9UK32 745 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 IRAK3Q9Y616 596 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 TMEM164Q5U3C3 297 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 GPR142Q7Z601 462 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 NOA1Q8NC60 698 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 DNAJB14Q8TBM8 379 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 DCUN1D5Q9BTE7 237 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF536O15090 1300 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 CHD2O14647 1828 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 VSTM5A8MXK1 200 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 F8VZ95 297 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 EPHB6O15197 1021 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 FGF10O15520 208 aaPredicted RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 RLN1P04808 185 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 HGFP14210 728 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 CCINQ13939 588 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 KCNT2Q6UVM3 1135 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 CHSY3Q70JA7 882 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 GALNT13Q8IUC8 556 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 Q96MT0 163 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 SEC24CP53992 1094 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 HJURPQ8NCD3 748 aaPredicted RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 LGALS2P05162 132 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 KELP23276 732 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 TKTP29401 623 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 SSR2P43308 183 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 PRKG2Q13237 762 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 NPNTQ6UXI9 565 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 SLC26A11Q86WA9 606 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 PNPT1Q8TCS8 783 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 ABHD5Q8WTS1 349 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 CDC42EP4Q9H3Q1 356 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 IFT46Q9NQC8 304 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 CNTRLQ7Z7A1 2325 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 CPED1A4D0V7 1026 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 MAGEA13PA6NCF6 341 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 CSH1P0DML2 217 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 CSH2P0DML3 217 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 MECP2P51608 486 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 ALDH3A2P51648 485 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 INHBEP58166 350 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 SLC6A3Q01959 620 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 POU5F2Q8N7G0 328 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 BSNDQ8WZ55 320 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 EFHD2Q96C19 240 aaPredicted RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.25□□□□□ -0.612e-12■■■□□ 15.7
PRPF40A-202ENST00000410080 BTRCQ9Y297 605 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF510Q9Y2H8 683 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 TNPO3Q9Y5L0 923 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 FRMPD1Q5SYB0 1578 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 NOS1APO75052 506 aaPredicted RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 FGBP02675 491 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 LINC00032P0C843 101 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 CDH5P33151 784 aaPredicted RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 ELK3P41970 407 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 DGKEP52429 567 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 RPL38P63173 70 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 DGUOKQ16854 277 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 C4orf46Q504U0 113 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 CCNYL2Q5T2Q4 361 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 SPATA6LQ8N4H0 392 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 MPP4Q96JB8 637 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 KLHL32Q96NJ5 620 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 IL22Q9GZX6 179 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 DDX4Q9NQI0 724 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 CFAP97Q9P2B7 532 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 DCXO43602 365 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 OR1D2P34982 312 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 SULT2A1Q06520 285 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 MSANTD1Q6ZTZ1 278 aa11.25□□□□□ -0.61
PRPF40A-202ENST00000410080 HIPK1Q86Z02 1210 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms