RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, human

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX3-208	ENST00000409828	ELFN1	P0C7U0	828 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	ITIH2	P19823	946 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	HNRNPA2B1	P22626	353 aa	Known RBP	18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	RPL22	P35268	128 aa	Known RBP	18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	LIG3	P49916	1009 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	OVGP1	Q12889	678 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	ARHGEF7	Q14155	803 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	SLC1A5	Q15758	541 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	PCSK7	Q16549	785 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	LPAL2	Q16609	132 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	LRRC73	Q5JTD7	316 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	FAM182A	Q5T1J6	154 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	SEL1L3	Q68CR1	1132 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	ARMCX6	Q7L4S7	300 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	LINC00523	Q86TU6	105 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	IQCH	Q86VS3	1027 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	TMEM145	Q8NBT3	493 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	IPMK	Q8NFU5	416 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	EBF2	Q9HAK2	575 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	CDC23	Q9UJX2	597 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	NEU2	Q9Y3R4	380 aa		18.19	■□□□□ 0.5
PAX3-208	ENST00000409828	RGSL1	A5PLK6	1076 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	IGLON5	A6NGN9	336 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	PDE2A	O00408	941 aa	Predicted RBP	18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	TOR1B	O14657	336 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	BCAT2	O15382	392 aa	Predicted RBP	18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	MMP20	O60882	483 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	SUN1	O94901	812 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	C6	P13671	934 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	LHCGR	P22888	699 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	AKT2	P31751	481 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	MPL	P40238	635 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	CDK16	Q00536	496 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	GALNT3	Q14435	633 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	CNGA3	Q16281	694 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	CDKN3	Q16667	212 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	DUOXA1	Q1HG43	343 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	SIRPB2	Q5JXA9	342 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	SLC23A3	Q6PIS1	610 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	CRTC1	Q6UUV9	634 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	SYDE1	Q6ZW31	735 aa	Predicted RBP	18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	ZNF572	Q7Z3I7	529 aa	Predicted RBP	18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	NLRP8	Q86W28	1048 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	GPR161	Q8N6U8	529 aa	Known RBP	18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	GLIS1	Q8NBF1	620 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	CCHCR1	Q8TD31	782 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	PIGK	Q92643	395 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	C19orf43	Q9BQ61	176 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	ETNK1	Q9HBU6	452 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	EIF2B3	Q9NR50	452 aa	Known RBP	18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	TMEM74B	Q9NUR3	256 aa		18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	PTPRZ1	P23471	2315 aa	Predicted RBP	18.18	■□□□□ 0.5
PAX3-208	ENST00000409828	ECEL1	O95672	775 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	PAK4	O96013	591 aa	Predicted RBP	18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	PRKCG	P05129	697 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	ALPI	P09923	528 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	ZNF806	P0C7X5	589 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	ETS1	P14921	441 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	CTPS1	P17812	591 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	MAT2A	P31153	395 aa	Known RBP	18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	AFF3	P51826	1226 aa	Known RBP	18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	FGL2	Q14314	439 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	MFSD2A	Q8NA29	543 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	KIF18A	Q8NI77	898 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	SNX19	Q92543	992 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	SKA1	Q96BD8	255 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	CENPT	Q96BT3	561 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	SERAC1	Q96JX3	654 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	COQ10A	Q96MF6	247 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	KLF6	Q99612	283 aa	Predicted RBP	18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	WRAP53	Q9BUR4	548 aa	Known RBP	18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	DDX47	Q9H0S4	455 aa	Known RBP	18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	CDH19	Q9H159	772 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	ARRDC1-AS1	Q9H2J1	176 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	RAB6B	Q9NRW1	208 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	NCDN	Q9UBB6	729 aa		18.17	■□□□□ 0.5
PAX3-208	ENST00000409828	SLC31A1	O15431	190 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	LZTS3	O60299	673 aa	Predicted RBP	18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	MAGEC1	O60732	1142 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	AGT	P01019	485 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	KRT14	P02533	472 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	MAOB	P27338	520 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	MAGEA6	P43360	314 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	STC1	P52823	247 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	PTS	Q03393	145 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	CKAP4	Q07065	602 aa	Known RBP	18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	STAT4	Q14765	748 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	CSRP2	Q16527	193 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	WHAMMP3	Q1A5X7	153 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	LRRC66	Q68CR7	880 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	ZNF765	Q7L2R6	523 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	NRSN1	Q8IZ57	195 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	PDCD7	Q8N8D1	485 aa	Known RBP	18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	SPATA4	Q8NEY3	305 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	PHOX2B	Q99453	314 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	TBL1Y	Q9BQ87	522 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	FICD	Q9BVA6	458 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	ZFYVE1	Q9HBF4	777 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	TM9SF3	Q9HD45	589 aa		18.16	■□□□□ 0.5
PAX3-208	ENST00000409828	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 231.9 ms