RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 ELOVL2Q9NXB9 296 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 KCTD5Q9NXV2 234 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 NSMCE4AQ9NXX6 385 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 LIMD1Q9UGP4 676 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 SNX24Q9Y343 169 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ACTL7AQ9Y615 435 aa4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 ATXN2Q99700 1313 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-203ENST00000409606 A0A087WUV0 522 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CXorf49A8MYA2 514 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CREB3O43889 395 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 SNAP91O60641 907 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 SNNO75324 88 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 POP4O95707 220 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 MYL4P12829 197 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 GJA1P17302 382 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 STX2P32856 288 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 GGT5P36269 586 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 NUDT1P36639 197 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 SSR1P43307 286 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CLCN7P51798 805 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 LIMK2P53671 638 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 DSC2Q02487 901 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 NR1H3Q13133 447 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ZNF234Q14588 700 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 FBXO43Q4G163 708 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ZNF805Q5CZA5 627 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 PPP6R3Q5H9R7 873 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 SPOUT1Q5T280 376 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ARHGEF18Q6ZSZ5 1173 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ZNF771Q7L3S4 317 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 C11orf96Q7Z7L8 435 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 LRRC56Q8IYG6 542 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CYP4X1Q8N118 509 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CFAP52Q8N1V2 620 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 AADATQ8N5Z0 425 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 DENND6BQ8NEG7 585 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 MICAL1Q8TDZ2 1067 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 C1QTNF2Q9BXJ5 285 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 MAK16Q9BXY0 300 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 PCOLCE2Q9UKZ9 415 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 TRIOO75962 3097 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ESYT3A0FGR9 886 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 HEATR9A2RTY3 570 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 KRBA1A5PL33 1030 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 A6NCN8 305 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ADRB1P08588 477 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ELK3P41970 407 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 SKIV2L2P42285 1042 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 DGKGP49619 791 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CCR5P51681 352 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CDKL1Q00532 357 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ELAVL3Q14576 367 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CTSL3PQ5NE16 218 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 IER5LQ5T953 404 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 TXNDC11Q6PKC3 985 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CRTC1Q6UUV9 634 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ATG14Q6ZNE5 492 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 TPGS1Q6ZTW0 290 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CENPUQ71F23 418 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ZC3HC1Q86WB0 502 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 KLHL7Q8IXQ5 586 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 OTUD6BQ8N6M0 293 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ATP11CQ8NB49 1132 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 TMEM145Q8NBT3 493 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 FBXO36Q8NEA4 188 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ARRDC3Q96B67 414 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 GDAP1L1Q96MZ0 367 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ZNF317Q96PQ6 595 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CPNE1Q99829 537 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 FICDQ9BVA6 458 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CD320Q9NPF0 282 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 SUN2Q9UH99 717 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 SARDHQ9UL12 918 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 GRID1Q9ULK0 1009 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 MMP17Q9ULZ9 603 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 FADS3Q9Y5Q0 445 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 WNT6Q9Y6F9 365 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 MYO18AQ92614 2054 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 KLHL33A6NCF5 533 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 GOLGA6CA6NDK9 693 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 GOLGA6BA6NDN3 693 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 HMGB1P1B2RPK0 211 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ASMTLO95671 621 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 MT-CYBP00156 380 aaPredicted RBP4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ADH1BP00325 375 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 PDHA1P08559 390 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 GOLGA6DP0CG33 693 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CRHR1P34998 444 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 AVPR1AP37288 418 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 GRTP1Q5TC63 336 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 GRAMD4Q6IC98 578 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 RETSATQ6NUM9 610 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 TTC23LQ6PF05 361 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 TPRG1Q6ZUI0 275 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 ASCL5Q7RTU5 278 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 EXOC3L1Q86VI1 746 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 MFN1Q8IWA4 741 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 SPATA22Q8NHS9 363 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 HMGCLL1Q8TB92 370 aa4.86□□□□□ -1.63
R3HDM1-203ENST00000409606 CERS2Q96G23 380 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms