RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ZDHHC6Q9H6R6 413 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 CAB39LQ9H9S4 337 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 FBXO6Q9NRD1 293 aaPredicted RBP14.1□□□□□ -0.15
GPNMB-203ENST00000409458 SNX15Q9NRS6 342 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 NLE1Q9NVX2 485 aaPredicted RBP14.1□□□□□ -0.15
GPNMB-203ENST00000409458 MARCH4Q9P2E8 410 aaPredicted RBP14.1□□□□□ -0.15
GPNMB-203ENST00000409458 FBXO5Q9UKT4 447 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 ZNF711Q9Y462 761 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 SCN8AQ9UQD0 1980 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 C2orf81A6NN90 581 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 PRRT4C9JH25 899 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 LAMP2P13473 410 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 PDE1CQ14123 709 aaPredicted RBP14.1□□□□□ -0.15
GPNMB-203ENST00000409458 UGP2Q16851 508 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 ZNF789Q5FWF6 425 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 NAIF1Q69YI7 327 aaPredicted RBP14.1□□□□□ -0.15
GPNMB-203ENST00000409458 GRAMD4Q6IC98 578 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 LVRNQ6Q4G3 990 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 LDB1Q86U70 411 aaPredicted RBP14.1□□□□□ -0.15
GPNMB-203ENST00000409458 CILP2Q8IUL8 1156 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 OR2A12Q8NGT7 310 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 CALML6Q8TD86 181 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 ACMSDQ8TDX5 336 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 CKAP2Q8WWK9 683 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 ELSPBP1Q96BH3 223 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 GPR22Q99680 433 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 SLC13A1Q9BZW2 595 aa14.1□□□□□ -0.15
GPNMB-203ENST00000409458 A0A0J9YYE9 177 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 SRRM3A6NNA2 597 aaPredicted RBP14.09□□□□□ -0.15
GPNMB-203ENST00000409458 TRBC1P01850 177 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 ASLP04424 464 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 SRPRAP08240 638 aaKnown RBP14.09□□□□□ -0.15
GPNMB-203ENST00000409458 DLDP09622 509 aaKnown RBP14.09□□□□□ -0.15
GPNMB-203ENST00000409458 LPOP22079 712 aaPredicted RBP14.09□□□□□ -0.15
GPNMB-203ENST00000409458 PSMA3P25788 255 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 GMPRP36959 345 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 MTHFRP42898 656 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 ETV4P43268 484 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 CD151P48509 253 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 RPL26P61254 145 aaKnown RBP14.09□□□□□ -0.15
GPNMB-203ENST00000409458 IL9RQ01113 521 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 RUNX3Q13761 415 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 SEMA3AQ14563 771 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 LRIT3Q3SXY7 679 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 PPM1JQ5JR12 505 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 KIAA0408Q6ZU52 694 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 LYSMD3Q7Z3D4 306 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 SFTPA1Q8IWL2 248 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 YAF2Q8IY57 180 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 PHTF2Q8N3S3 785 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 CPA6Q8N4T0 437 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 ECHDC3Q96DC8 303 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 CDKN2AIPNLQ96HQ2 116 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 FAM111AQ96PZ2 611 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 GTSE1Q9NYZ3 720 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 HACD3Q9P035 362 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 DEC1Q9P2X7 70 aa14.09□□□□□ -0.15
GPNMB-203ENST00000409458 RPL26L1Q9UNX3 145 aaKnown RBP14.09□□□□□ -0.15
GPNMB-203ENST00000409458 ZNF106Q9H2Y7 1883 aaKnown RBP14.08□□□□□ -0.15
GPNMB-203ENST00000409458 GMNCA6NCL1 334 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 CAPN8A6NHC0 703 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 WASH3PC4AMC7 463 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 HAUS5O94927 633 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 POP4O95707 220 aaKnown RBP14.08□□□□□ -0.16
GPNMB-203ENST00000409458 UGT2B4P06133 528 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 ATP5BP06576 529 aaKnown RBP14.08□□□□□ -0.16
GPNMB-203ENST00000409458 PRSS56P0CW18 603 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 PSMC3P17980 439 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 TYK2P29597 1187 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 VASPP50552 380 aaPredicted RBP14.08□□□□□ -0.16
GPNMB-203ENST00000409458 COL19A1Q14993 1142 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 SEPT7Q16181 437 aaKnown RBP14.08□□□□□ -0.16
GPNMB-203ENST00000409458 HHATQ5VTY9 493 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 CNSTQ6PJW8 725 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 AFTPHQ6ULP2 937 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 SLC41A1Q8IVJ1 513 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 CNPY4Q8N129 248 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 PAF1Q8N7H5 531 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 GABPB2Q8TAK5 448 aaPredicted RBP14.08□□□□□ -0.16
GPNMB-203ENST00000409458 GRIN3AQ8TCU5 1115 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 SPOCK2Q92563 424 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 EID2BQ96D98 161 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 ZNF317Q96PQ6 595 aaPredicted RBP14.08□□□□□ -0.16
GPNMB-203ENST00000409458 RPP25Q9BUL9 199 aaKnown RBP14.08□□□□□ -0.16
GPNMB-203ENST00000409458 CPEB1Q9BZB8 566 aaKnown RBP14.08□□□□□ -0.16
GPNMB-203ENST00000409458 IQCGQ9H095 443 aaKnown RBP14.08□□□□□ -0.16
GPNMB-203ENST00000409458 MTG2Q9H4K7 406 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 SUV39H2Q9H5I1 410 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 MAGEE1Q9HCI5 957 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 BPIFA1Q9NP55 256 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 FKBPLQ9UIM3 349 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 SLC39A10Q9ULF5 831 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 PLLPQ9Y342 182 aa14.08□□□□□ -0.16
GPNMB-203ENST00000409458 FAM95CA0A1B0GW59 222 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 CD3EAPO15446 510 aaKnown RBP14.07□□□□□ -0.16
GPNMB-203ENST00000409458 DHRS4L1P0CG22 281 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 FOXN2P32314 431 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 CRHR1P34998 444 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 GJA4P35212 333 aa14.07□□□□□ -0.16
GPNMB-203ENST00000409458 NNMTP40261 264 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms