RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 OPHN1O60890 802 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 RECQL5O94762 991 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 ALPIP09923 528 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 THEGLP0DJG4 465 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 LHCGRP22888 699 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 CDK18Q07002 472 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 LRRC14Q15048 493 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 PTPRRQ15256 657 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 Q6ZSR6 202 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 TP53I13Q8NBR0 393 aaPredicted RBP19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 OR13H1Q8NG92 308 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 RMDN1Q96DB5 314 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 SPATA13Q96N96 652 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 GBA3Q9H227 469 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 ERVMER34-1Q9H9K5 563 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 DLL3Q9NYJ7 618 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 UBP1Q9NZI7 540 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 RSPH14Q9UHP6 348 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 DNPEPQ9ULA0 475 aa19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 ASCC3Q8N3C0 2202 aaKnown RBP19.9■□□□□ 0.78
PDLIM2-207ENST00000409417 C5orf60A6NFR6 353 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 CAPN8A6NHC0 703 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 PSMD11O00231 422 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 CEP104O60308 925 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 PMPCBO75439 489 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 ZNF883P0CG24 379 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 CXCR5P32302 372 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 RABIFP47224 123 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 SLC14A1Q13336 389 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 ARHGEF7Q14155 803 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 ACOX1Q15067 660 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 PCSK7Q16549 785 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 QPCTQ16769 361 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 ZNF423Q2M1K9 1284 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 WSCD2Q2TBF2 565 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 UAP1L1Q3KQV9 507 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 ANKRD20A2Q5SQ80 823 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 ANKRD20A1Q5TYW2 823 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 ANKRD20A3Q5VUR7 823 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 KDELC2Q7Z4H8 507 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 PTAR1Q7Z6K3 402 aaPredicted RBP19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 SPATS2Q86XZ4 545 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 DCP2Q8IU60 420 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 SLC35F6Q8N357 371 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 FAM71DQ8N9W8 422 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 ATG4AQ8WYN0 398 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 OXNAD1Q96HP4 312 aaPredicted RBP19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 COQ10AQ96MF6 247 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 LYSMD1Q96S90 227 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 IL21RQ9HBE5 538 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 GPR27Q9NS67 375 aa19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 FNDC3AQ9Y2H6 1198 aaKnown RBP19.89■□□□□ 0.77
PDLIM2-207ENST00000409417 ADAMTS9Q9P2N4 1935 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 LIASO43766 372 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 EPOP01588 193 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 FGGP02679 453 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 ZNF30P17039 623 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 GM2AP17900 193 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 WNT3AP56704 352 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 PFN3P60673 137 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 IRF4Q15306 451 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 CRTC1Q6UUV9 634 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 KDELC1Q6UW63 502 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 TSPAN33Q86UF1 283 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 CCDC110Q8TBZ0 833 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 IFT43Q96FT9 208 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 SMIM14Q96QK8 99 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 ELF4Q99607 663 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 RTKNQ9BST9 563 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 TMEM121Q9BTD3 319 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 MLPHQ9BV36 600 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 MBNL1Q9NR56 388 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 KCTD5Q9NXV2 234 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 DNAH14Q0VDD8 3507 aa19.88■□□□□ 0.77
PDLIM2-207ENST00000409417 TOR1BO14657 336 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 TM4SF5O14894 197 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 NDST3O95803 873 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 STIP1P31948 543 aaKnown RBP19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 IGFALSP35858 605 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 MPP3Q13368 585 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 GALNT3Q14435 633 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 SIX1Q15475 284 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 LRRC66Q68CR7 880 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 CCDC70Q6NSX1 233 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 SLC22A18ASQ8N1D0 253 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 MAIP1Q8WWC4 291 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 C1orf54Q8WWF1 131 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 PBKQ96KB5 322 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 ZKSCAN5Q9Y2L8 839 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 DCHS1Q96JQ0 3298 aa19.87■□□□□ 0.77
PDLIM2-207ENST00000409417 LOC285095A0A1B0GVY8 99 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 F5H423 210 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 GCATO75600 419 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 ANXA9O76027 345 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 ARRB1P49407 418 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 YPEL5P62699 121 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 PTSQ03393 145 aa19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 PUM1Q14671 1186 aaKnown RBP eCLIP19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 OASLQ15646 514 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-207ENST00000409417 CCNG2Q16589 344 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms