RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 AREL1O15033 823 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 TM9SF1O15321 606 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 SLC26A4O43511 780 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 DCXO43602 365 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 BUD23O43709 281 aaKnown RBP5.55□□□□□ -1.52
CLK1-202ENST00000409403 IDH3BO43837 385 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 B4GALT4O60513 344 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 LDHAP00338 332 aaKnown RBP5.55□□□□□ -1.52
CLK1-202ENST00000409403 RSPH10BP0C881 870 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 SMIM18P0DKX4 95 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 MALP21145 153 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 PEX2P28328 305 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 PCSK1P29120 753 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 FOXN2P32314 431 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 NT5C2P49902 561 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 HADHBP55084 474 aaKnown RBP5.55□□□□□ -1.52
CLK1-202ENST00000409403 CTXN1P60606 82 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 RAC3P60763 192 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 NAA20P61599 178 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 NKX6-1P78426 367 aaPredicted RBP5.55□□□□□ -1.52
CLK1-202ENST00000409403 CREB5Q02930 508 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 DNAJC3Q13217 504 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 SP140Q13342 867 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 TMEM266Q2M3C6 531 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 CERKLQ49MI3 558 aaPredicted RBP5.55□□□□□ -1.52
CLK1-202ENST00000409403 NADK2Q4G0N4 442 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 FAAH2Q6GMR7 532 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 C11orf63Q6NUN7 778 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 SWSAP1Q6NVH7 229 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 UGT2A3Q6UWM9 527 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 ATG9AQ7Z3C6 839 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 ZNF410Q86VK4 478 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 CCDC25Q86WR0 208 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 CFHR4Q92496 578 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 ATOH1Q92858 354 aaPredicted RBP5.55□□□□□ -1.52
CLK1-202ENST00000409403 SNF8Q96H20 258 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 DNAJC1Q96KC8 554 aaKnown RBP5.55□□□□□ -1.52
CLK1-202ENST00000409403 CFAP57Q96MR6 1250 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 MRPL1Q9BYD6 325 aaKnown RBP5.55□□□□□ -1.52
CLK1-202ENST00000409403 TPK1Q9H3S4 243 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 EBF3Q9H4W6 596 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 ARMT1Q9H993 441 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 S100A14Q9HCY8 104 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 CD209Q9NNX6 404 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 IL23AQ9NPF7 189 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 VPS45Q9NRW7 570 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 DDX18Q9NVP1 670 aaKnown RBP5.55□□□□□ -1.52
CLK1-202ENST00000409403 MOCS1Q9NZB8 636 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 SELENONQ9NZV5 590 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 C6orf203Q9P0P8 240 aaPredicted RBP5.55□□□□□ -1.52
CLK1-202ENST00000409403 IGSF9Q9P2J2 1179 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 BCAP29Q9UHQ4 241 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 OGDHLQ9ULD0 1010 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 SORCS3Q9UPU3 1222 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 PCDHB2Q9Y5E7 798 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 PCDHGB6Q9Y5F9 930 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 SLC4A4Q9Y6R1 1079 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 VPS13AQ96RL7 3174 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 ARAP2Q8WZ64 1704 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 SPTBN2O15020 2390 aa5.55□□□□□ -1.52
CLK1-202ENST00000409403 CFAP69A5D8W1 941 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 GRXCR1A8MXD5 290 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 WNT10BO00744 389 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 PFDN6O15212 129 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 B4GALT3O60512 393 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 MTRF1O75570 445 aaKnown RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 ACSL3O95573 720 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 OXSR1O95747 527 aaPredicted RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 GH1P01241 217 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 TFAP2AP05549 437 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 UQCRFS1P1P0C7P4 283 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 FTH1P19P0C7X4 201 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 TYRP14679 529 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 FPR1P21462 350 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 TTKP33981 857 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 EIF2B2P49770 351 aaKnown RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 HNRNPFP52597 415 aaKnown RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 RPS3AP61247 264 aaKnown RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 NOP14P78316 857 aaKnown RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 STK4Q13043 487 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 SNAPC2Q13487 334 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 FGL2Q14314 439 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 SPCS2Q15005 226 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 HLFQ16534 295 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 PROSER3Q2NL68 480 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 ZNF829Q3KNS6 432 aaPredicted RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 ARL13BQ3SXY8 428 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 HERC4Q5GLZ8 1057 aaPredicted RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 EFHC1Q5JVL4 640 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 RARS2Q5T160 578 aaKnown RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 TMEM63BQ5T3F8 832 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 SNRNP48Q6IEG0 339 aaKnown RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 CCDC137Q6PK04 289 aaKnown RBP5.54□□□□□ -1.52
CLK1-202ENST00000409403 CLEC4GQ6UXB4 293 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 LRRC55Q6ZSA7 311 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 PIK3AP1Q6ZUJ8 805 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 TRABD2AQ86V40 505 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 TTC5Q8N0Z6 440 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 DENND1AQ8TEH3 1009 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 STON2Q8WXE9 905 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms