RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 PSMD13Q9UNM6 376 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 TRAFD1O14545 582 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 KRT8P05787 483 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 GALTP07902 379 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 HGFP14210 728 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 HSD17B3P37058 310 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 CRATP43155 626 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 DAOAP59103 153 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 ATP6V0D1P61421 351 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PLGLB1Q02325 96 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 IL10RBQ08334 325 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 RFTN1Q14699 578 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 TAPT1Q6NXT6 567 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 RHBDF2Q6PJF5 856 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM220Q6QAJ8 160 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF621Q6ZSS3 439 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 R3HCC1LQ7Z5L2 792 aaKnown RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 SERINC5Q86VE9 423 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 C12orf76Q8N812 135 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF461Q8TAF7 563 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 LNX1Q8TBB1 728 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 CLP1Q92989 425 aaKnown RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 TPD52L3Q96J77 140 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 TBCDQ9BTW9 1192 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 SPATA5L1Q9BVQ7 753 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 EFCAB1Q9HAE3 211 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PCDH18Q9HCL0 1135 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PTPRHQ9HD43 1115 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 MAT2BQ9NZL9 334 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 VPS4AQ9UN37 437 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 USP15Q9Y4E8 981 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 NCANO14594 1321 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 NRXN3Q9Y4C0 1643 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 LOC100653049A0A140TA62 436 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 TPP1O14773 563 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 KLRC4O43908 158 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 KRT34O76011 436 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 NDST3O95803 873 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 CST3P01034 146 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 FAM163BP0C2L3 166 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 CCDC166P0CW27 439 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 VAV1P15498 845 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PECAM1P16284 738 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 EN2P19622 333 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 POU1F1P28069 291 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 RBMS1P29558 406 aaKnown RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 CCT8P50990 548 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 BNC1Q01954 994 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PLOD1Q02809 727 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 MINDY4Q4G0A6 757 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 LRRC23Q53EV4 343 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 ATXN7L2Q5T6C5 722 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PRMT9Q6P2P2 845 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 LRRC74BQ6ZQY2 392 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 RABEPKQ7Z6M1 372 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 SLC51AQ86UW1 340 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 DPP10Q8N608 796 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PTGR2Q8N8N7 351 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF563Q8TA94 476 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 INPP5DQ92835 1189 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 DPYSL5Q9BPU6 564 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 SGK2Q9HBY8 427 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 BLOC1S6Q9UL45 172 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 N6AMT1Q9Y5N5 214 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 CRYBG1Q9Y4K1 1723 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 OR2AG2A6NM03 316 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 FFAR2O15552 330 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PHGDHO43175 533 aaKnown RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 LIASO43766 372 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 ERAL1O75616 437 aaKnown RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 SERPINE1P05121 402 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 SLC35G6P0C7Q6 338 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 CCNYL3P0C7X3 344 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 TYRP14679 529 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 SSR2P43308 183 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 ASPAP45381 313 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 ENPEPQ07075 957 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF155Q12901 538 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 GPR17Q13304 367 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 LSM12Q3MHD2 195 aaKnown RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 FAM20CQ8IXL6 584 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 SPPL2AQ8TCT8 520 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 FIG4Q92562 907 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 HDAC10Q969S8 669 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 KLHDC7BQ96G42 594 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 C12orf66Q96MD2 445 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 ACAT2Q9BWD1 397 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PCBD2Q9H0N5 130 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 SMG9Q9H0W8 520 aaKnown RBP5.02□□□□□ -1.61
SCN3A-203ENST00000409101 OR2AG1Q9H205 316 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 USE1Q9NZ43 259 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PCDHGC3Q9UN70 934 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 CORO2BQ9UQ03 480 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 PCDHGB3Q9Y5G1 929 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 MYADML2A6NDP7 307 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 KRT75O95678 551 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 OTCP00480 354 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 BGNP21810 368 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 KCNA3P22001 575 aa5.02□□□□□ -1.61
SCN3A-203ENST00000409101 CCNFP41002 786 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms