RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 HIST1H2ABP04908 130 aa13□□□□□ -0.33
RNF43-201ENST00000407977 FGF1P05230 155 aa13□□□□□ -0.33
RNF43-201ENST00000407977 SLC6A2P23975 617 aa13□□□□□ -0.33
RNF43-201ENST00000407977 OMPP47874 163 aa13□□□□□ -0.33
RNF43-201ENST00000407977 PSEN1P49768 467 aa13□□□□□ -0.33
RNF43-201ENST00000407977 ITGA7Q13683 1181 aa13□□□□□ -0.33
RNF43-201ENST00000407977 PAN2Q504Q3 1202 aaKnown RBP13□□□□□ -0.33
RNF43-201ENST00000407977 RUNDC3AQ59EK9 446 aa13□□□□□ -0.33
RNF43-201ENST00000407977 PRR23BQ6ZRT6 265 aa13□□□□□ -0.33
RNF43-201ENST00000407977 HIST3H2AQ7L7L0 130 aa13□□□□□ -0.33
RNF43-201ENST00000407977 ZNF655Q8N720 491 aaPredicted RBP13□□□□□ -0.33
RNF43-201ENST00000407977 RASSF5Q8WWW0 418 aa13□□□□□ -0.33
RNF43-201ENST00000407977 HIST1H2ACQ93077 130 aa13□□□□□ -0.33
RNF43-201ENST00000407977 LHX5Q9H2C1 402 aa13□□□□□ -0.33
RNF43-201ENST00000407977 SP140LQ9H930 580 aa13□□□□□ -0.33
RNF43-201ENST00000407977 BTRCQ9Y297 605 aa13□□□□□ -0.33
RNF43-201ENST00000407977 CASKO14936 926 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 HNRNPLP14866 589 aaKnown RBP eCLIP12.99□□□□□ -0.33
RNF43-201ENST00000407977 TAS2R40P59535 323 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 TGFB2P61812 414 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 CYP4F2P78329 520 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 CYP4F3Q08477 520 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 ZNHIT3Q15649 155 aaPredicted RBP12.99□□□□□ -0.33
RNF43-201ENST00000407977 RFTN2Q52LD8 501 aaPredicted RBP12.99□□□□□ -0.33
RNF43-201ENST00000407977 SUN5Q8TC36 379 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 CLPTM1LQ96KA5 538 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 ASB8Q9H765 288 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 OGDHLQ9ULD0 1010 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 BCKDKO14874 412 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 BANF1O75531 89 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 PGK1P00558 417 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 NR2F1P10589 423 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 ARPC4P59998 168 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 RPL26P61254 145 aaKnown RBP12.99□□□□□ -0.33
RNF43-201ENST00000407977 SLC1A5Q15758 541 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 GLYATQ6IB77 296 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.99□□□□□ -0.33
RNF43-201ENST00000407977 P2RY8Q86VZ1 359 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 ROPN1LQ96C74 230 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 TSPAN18Q96SJ8 248 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 ZFP14Q9HCL3 533 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 A8MUI8 341 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 AP3D1O14617 1153 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 TSPAN3O60637 253 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 C2P06681 752 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 TIGD2Q4W5G0 525 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 FBXO42Q6P3S6 717 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 SVOPLQ8N434 492 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 HTRA1Q92743 480 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 SPATC1LQ9H0A9 340 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 MARCH2Q9P0N8 246 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 E9PCH4 1651 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 TFECO14948 347 aaPredicted RBP12.99□□□□□ -0.33
RNF43-201ENST00000407977 IGFBP5P24593 272 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 GLIS3Q8NEA6 775 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 TMCO6Q96DC7 493 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 MTFMTQ96DP5 389 aaKnown RBP12.99□□□□□ -0.33
RNF43-201ENST00000407977 PWWP2AQ96N64 755 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 SNX7Q9UNH6 387 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 PSMD11O00231 422 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 SPTLC1O15269 473 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 IPO13O94829 963 aaKnown RBP12.99□□□□□ -0.33
RNF43-201ENST00000407977 INTS5Q6P9B9 1019 aaKnown RBP12.99□□□□□ -0.33
RNF43-201ENST00000407977 LPGAT1Q92604 370 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 MKL1Q969V6 931 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 ZYG11BQ9C0D3 744 aa12.99□□□□□ -0.33
RNF43-201ENST00000407977 TDRKHQ9Y2W6 561 aaKnown RBP12.99□□□□□ -0.33
RNF43-201ENST00000407977 SPATA31A1Q5TZJ5 1347 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 MTA2O94776 668 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 LINC00032P0C843 101 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 MATKP42679 507 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 CTSKP43235 329 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 TMPRSS11AQ6ZMR5 421 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 ARL10Q8N8L6 244 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 VMP1Q96GC9 406 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 TIMM13Q9Y5L4 95 aaPredicted RBP12.98□□□□□ -0.33
RNF43-201ENST00000407977 C5orf60A6NFR6 353 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 FTH1P02794 183 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 LPOP22079 712 aaPredicted RBP12.98□□□□□ -0.33
RNF43-201ENST00000407977 MTHFRP42898 656 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 FCGRTP55899 365 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 PTGES3Q15185 160 aaKnown RBP12.98□□□□□ -0.33
RNF43-201ENST00000407977 TCEA2Q15560 299 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 SETMARQ53H47 684 aaPredicted RBP12.98□□□□□ -0.33
RNF43-201ENST00000407977 ZZZ3Q8IYH5 903 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 FCGR1BQ92637 280 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 IDI2Q9BXS1 227 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 ATP6AP2A0A1C7CYW4 349 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 ATP6AP2O75787 350 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 CKBP12277 381 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 EPORP19235 508 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 RPL7AP62424 266 aaKnown RBP12.98□□□□□ -0.33
RNF43-201ENST00000407977 ACOX1Q15067 660 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 C6orf52Q5T4I8 152 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 SLC34A3Q8N130 599 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 C1QTNF1Q9BXJ1 281 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 NXF3Q9H4D5 531 aaKnown RBP12.98□□□□□ -0.33
RNF43-201ENST00000407977 COQ6Q9Y2Z9 468 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 CARNS1A5YM72 827 aa12.98□□□□□ -0.33
RNF43-201ENST00000407977 ANGPTL1O95841 491 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms