RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ZNF41P51814 821 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 PNLIPRP2P54317 469 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 GALNT3Q14435 633 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 PGM5Q15124 567 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 PCGF3Q3KNV8 242 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 SLC9C1Q4G0N8 1177 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 PXDC1Q5TGL8 231 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 ASPHD1Q5U4P2 390 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 FAM43BQ6ZT52 329 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 PLPPR4Q7Z2D5 763 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 KDELC2Q7Z4H8 507 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 TBC1D26Q86UD7 250 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 TDRPQ86YL5 185 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 KIAA2013Q8IYS2 634 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 Q8NFD4 153 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 DUSP19Q8WTR2 217 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 PIGKQ92643 395 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 KAT2BQ92831 832 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZKSCAN4Q969J2 545 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 MSI2Q96DH6 328 aaKnown RBP5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 ELMOD3Q96FG2 381 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 MRPL1Q9BYD6 325 aaKnown RBP5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 TKTL2Q9H0I9 626 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 ACTR5Q9H9F9 607 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 RANGRFQ9HD47 186 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZBTB40Q9NUA8 1239 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 CPSF2Q9P2I0 782 aaKnown RBP5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 AAR2Q9Y312 384 aaKnown RBP5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 FAM96BQ9Y3D0 163 aa5.07□□□□□ -1.6
HMGB1P13-201ENST00000406019 SOS1Q07889 1333 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 TRBV5-7A0A0A0MS05 114 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 SOCS2O14508 198 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 RNMTO43148 476 aaKnown RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 TLX3O43711 291 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 HS6ST1O60243 411 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 TBCAO75347 108 aaKnown RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 SLC25A12O75746 678 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 TPPPO94811 219 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 NKX2-2O95096 273 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 AFPP02771 609 aaKnown RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 SRPRAP08240 638 aaKnown RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 CYP19A1P11511 503 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 KRT10P13645 584 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 TRIM21P19474 475 aaKnown RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 PON1P27169 355 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 CTNNA1P35221 906 aaKnown RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 LMAN1P49257 510 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 CLCNKBP51801 687 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 STAT2P52630 851 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 MRPS5P82675 430 aaKnown RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 TFCP2Q12800 502 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 GRIK3Q13003 919 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 IKQ13123 557 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 RUNX2Q13950 521 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 DRAP1Q14919 205 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 TWIST1Q15672 202 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 ADIPOQQ15848 244 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 C15orf59Q2T9L4 293 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 LEXMQ3ZCV2 418 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 C9orf152Q5JTZ5 239 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 IRF2BP2Q7Z5L9 587 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 SNAPC3Q92966 411 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 LRRC59Q96AG4 307 aaKnown RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 TMCO6Q96DC7 493 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZFYVE19Q96K21 471 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 SPATA17Q96L03 361 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 BBS4Q96RK4 519 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 SEPT5Q99719 369 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 TUBB6Q9BUF5 446 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 C1QTNF5Q9BXJ0 243 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 NUF2Q9BZD4 464 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 PLK3Q9H4B4 646 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZWILCHQ9H900 591 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 WDR6Q9NNW5 1121 aaKnown RBP5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 TRPV2Q9Y5S1 764 aa5.06□□□□□ -1.6
HMGB1P13-201ENST00000406019 ZNF644Q9H582 1327 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 A0A0U1RQF3 1178 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 hCG_1809904A0A1W2PP81 198 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 A0A1W2PPE2 198 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 A0A1W2PR64 198 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 A0A1W2PR77 199 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 HSPB2A8KAH6 182 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 KLRF2D3W0D1 207 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 PI4K2BG5E9Z4 385 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 KIF1CO43896 1103 aaKnown RBP5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 MITFO75030 526 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 NFATC1O95644 943 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 TMEM11P17152 192 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 IFNAR1P17181 557 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 CTPS1P17812 591 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 SRD5A1P18405 259 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 TFEBP19484 476 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 MUTP22033 750 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 KLRC2P26717 231 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 SHMT1P34896 483 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 CAPZA2P47755 286 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 GALCP54803 685 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 LINC00205P59089 165 aa5.05□□□□□ -1.6
HMGB1P13-201ENST00000406019 MTX1Q13505 466 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms