RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 CLPBQ9H078 707 aa16.85■□□□□ 0.29
CSNK1D-205ENST00000403276 SPASTQ9UBP0 616 aa16.85■□□□□ 0.29
CSNK1D-205ENST00000403276 PHTF1Q9UMS5 762 aa16.85■□□□□ 0.29
CSNK1D-205ENST00000403276 HEY1Q9Y5J3 304 aa16.85■□□□□ 0.29
CSNK1D-205ENST00000403276 ARHGEF17Q96PE2 2063 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 A0A1W2PQ67 120 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 SRRM3A6NNA2 597 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 KRT1P04264 644 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 ALPIP09923 528 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 CDK4P11802 303 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 TSHRP16473 764 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 COMTP21964 271 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 FECHP22830 423 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 LHCGRP22888 699 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 VIPR1P32241 457 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 INSM1Q01101 510 aaPredicted RBP16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 NIPAL4Q0D2K0 466 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 TARDBPQ13148 414 aaKnown RBP eCLIP16.84■□□□□ 0.293e-6■■■■□ 20.8
CSNK1D-205ENST00000403276 ILKQ13418 452 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 MTM1Q13496 603 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 NFATC4Q14934 902 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 TCEAL1Q15170 157 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 ALG11Q2TAA5 492 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 RALGPS1Q5JS13 557 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 ARMC12Q5T9G4 340 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 NPNTQ6UXI9 565 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 B4GALNT4Q76KP1 1039 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 TSPAN33Q86UF1 283 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 FAM181AQ8N9Y4 354 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 PIH1D2Q8WWB5 315 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 SPOCK2Q92563 424 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 FUBP1Q96AE4 644 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 COQ10AQ96MF6 247 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 IL12RB2Q99665 862 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 MAK16Q9BXY0 300 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 POLR1EQ9GZS1 481 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 GOLPH3Q9H4A6 298 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 CCDC86Q9H6F5 360 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 FREM2Q5SZK8 3169 aa16.84■□□□□ 0.29
CSNK1D-205ENST00000403276 NPIPB15A6NHN6 443 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 YY2O15391 372 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 SPOPO43791 374 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 HEXIM1O94992 359 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 JCHAINP01591 159 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 HLA-DQB2P05538 268 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 CYP2A6P11509 494 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 MX2P20592 715 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 HTR1BP28222 390 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 HK3P52790 923 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 SRP54P61011 504 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 CYP4F3Q08477 520 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 CCDC173Q0VFZ6 552 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 LLGL1Q15334 1064 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 CDKN3Q16667 212 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 SLC9A4Q6AI14 798 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 ZCCHC8Q6NZY4 707 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 HSD11B1LQ7Z5J1 315 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 RFX6Q8HWS3 928 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 RHOT1Q8IXI2 618 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 CCDC13Q8IYE1 715 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 ARRDC2Q8TBH0 407 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 HDAC11Q96DB2 347 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 SCRN2Q96FV2 425 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 WDR92Q96MX6 357 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 LGR4Q9BXB1 951 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 MRPL40Q9NQ50 206 aaKnown RBP16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 CHKBQ9Y259 395 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 PCDHA13Q9Y5I0 950 aa16.83■□□□□ 0.28
CSNK1D-205ENST00000403276 ACACAQ13085 2346 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 CPED1A4D0V7 1026 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 TMEM202A6NGA9 273 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 KCNK1O00180 336 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 APOL1O14791 398 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 FZD6O60353 706 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 LCA5LO95447 670 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 ANXA6P08133 673 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 CTSEP14091 401 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 HNF1BP35680 557 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 ETV3P41162 512 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 SLC1A1P43005 524 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 DYNLT1P63172 113 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 ODF2Q5BJF6 829 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 LRRC38Q5VT99 294 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 ALG1LQ6GMV1 187 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 PNCKQ6P2M8 343 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 MFSD7Q6UXD7 560 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 RFLNAQ6ZTI6 216 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 CBARPQ8N350 705 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 PDCD7Q8N8D1 485 aaKnown RBP16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 TPCN2Q8NHX9 752 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 IFI44Q8TCB0 444 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 FATE1Q969F0 183 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 NUS1Q96E22 293 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 PDXPQ96GD0 296 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 ZNF830Q96NB3 372 aaPredicted RBP16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 CEP41Q9BYV8 373 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 KLQ9UEF7 1012 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 SALL4Q9UJQ4 1053 aa16.82■□□□□ 0.28
CSNK1D-205ENST00000403276 PPIL1Q9Y3C6 166 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms