RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 BCAS2O75934 225 aaPredicted RBP17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 PSMC3P17980 439 aa17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 ADRA1AP35348 466 aa17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 MGAT5BQ3V5L5 792 aa17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 POTEHQ6S545 545 aa17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 PTGR2Q8N8N7 351 aaPredicted RBP17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 KLHDC9Q8NEP7 349 aa17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 HAPLN3Q96S86 360 aa17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 SYT17Q9BSW7 474 aa17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 SEMA4BQ9NPR2 832 aaPredicted RBP17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 TREX1Q9NSU2 369 aa17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 NSMCE4AQ9NXX6 385 aa17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 UTP6Q9NYH9 597 aaKnown RBP17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 EPS15L1Q9UBC2 864 aa17.08■□□□□ 0.33
SNRNP70-202ENST00000401730 OR1G1P47890 313 aa17.08■□□□□ 0.32
SNRNP70-202ENST00000401730 YWHAHQ04917 246 aaPredicted RBP17.08■□□□□ 0.32
SNRNP70-202ENST00000401730 GRB7Q14451 532 aa17.08■□□□□ 0.32
SNRNP70-202ENST00000401730 ZFP28Q8NHY6 868 aa17.08■□□□□ 0.32
SNRNP70-202ENST00000401730 CANT1Q8WVQ1 401 aa17.08■□□□□ 0.32
SNRNP70-202ENST00000401730 IGSF8Q969P0 613 aa17.08■□□□□ 0.32
SNRNP70-202ENST00000401730 RPRD1AQ96P16 312 aaPredicted RBP17.08■□□□□ 0.32
SNRNP70-202ENST00000401730 TMEM79Q9BSE2 394 aa17.08■□□□□ 0.32
SNRNP70-202ENST00000401730 ZNF385DQ9H6B1 395 aa17.08■□□□□ 0.32
SNRNP70-202ENST00000401730 GMIPQ9P107 970 aa17.08■□□□□ 0.32
SNRNP70-202ENST00000401730 TRIM38O00635 465 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 GFAPP14136 432 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 PBX3P40426 434 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 SPRYD7Q5W111 196 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 KLHDC10Q6PID8 442 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 SPPL2CQ8IUH8 684 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 RSPH1Q8WYR4 309 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 SEMA3CQ99985 751 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 SPON2Q9BUD6 331 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 Q9H521 79 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 ABCC13Q9NSE7 274 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 SH3BP2P78314 561 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 PLOD1Q02809 727 aaPredicted RBP17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 TRIM25Q14258 630 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 ANKRD23Q86SG2 305 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 ACBD6Q9BR61 282 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 PRDM16Q9HAZ2 1276 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 SARS2Q9NP81 518 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 TMCO1Q9UM00 188 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 HEATR9A2RTY3 570 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 TNPO2O14787 897 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 SNRPB2P08579 225 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 ALDOCP09972 364 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 FAM58BPP0C7Q3 252 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 HADHAP40939 763 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 POU4F1Q01851 419 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 RPS6KA2Q15349 733 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 SIRPB2Q5JXA9 342 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 RETREG3Q86VR2 466 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 CPSF7Q8N684 471 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 RTL3Q8N8U3 475 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 ZC3H15Q8WU90 426 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 TUBGCP3Q96CW5 907 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 AKTIPQ9H8T0 292 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 CSNK1G1Q9HCP0 422 aa17.07■□□□□ 0.32
SNRNP70-202ENST00000401730 SLCO1B7G3V0H7 640 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 H3BMM5 538 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 PCSK6P29122 969 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 THEM5Q8N1Q8 247 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 TRIML2Q8N7C3 387 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 DNAJB14Q8TBM8 379 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 GTF3C2Q8WUA4 911 aaPredicted RBP17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 VPS33AQ96AX1 596 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 CCDC28BQ9BUN5 200 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 SOX17Q9H6I2 414 aaPredicted RBP17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 RAD54BQ9Y620 910 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 ARHGEF37A1IGU5 675 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 GPR39O43194 453 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 TMCC1O94876 653 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 NCK1P16333 377 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 PRKAA2P54646 552 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 SEMA3AQ14563 771 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 KRT80Q6KB66 452 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 FAM171BQ6P995 826 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 CD300LGQ6UXG3 332 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 CILP2Q8IUL8 1156 aa17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 TMEM102Q8N9M5 508 aaPredicted RBP17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 DGCR14Q96DF8 476 aaKnown RBP17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 TRMT13Q9NUP7 481 aaKnown RBP17.06■□□□□ 0.32
SNRNP70-202ENST00000401730 PIP5K1BO14986 540 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 MUSKO15146 869 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 VILLO15195 856 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 NRP2O60462 931 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 FMO4P31512 558 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 ADARP55265 1226 aaKnown RBP17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 TBX4P57082 545 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 PCBP1Q15365 356 aaKnown RBP eCLIP17.05■□□□□ 0.322e-11■■□□□ 12.1
SNRNP70-202ENST00000401730 KIAA0930Q6ICG6 404 aaPredicted RBP17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 CYHR1Q6ZMK1 362 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 SETD3Q86TU7 594 aaPredicted RBP17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 ISCA2Q86U28 154 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 PGBD5Q8N414 524 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 TRPV1Q8NER1 839 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 BHMTQ93088 406 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 TSGA13Q96PP4 275 aa17.05■□□□□ 0.32
SNRNP70-202ENST00000401730 BTBD9Q96Q07 612 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms