RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PTGIRP43119 386 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 AFF3P51826 1226 aaKnown RBP7.54□□□□□ -1.2
USP16-204ENST00000399976 WNT3AP56704 352 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 ARHGAP8P85298 464 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 CDH17Q12864 832 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 PTK2BQ14289 1009 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 IHHQ14623 411 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 AADACL2Q6P093 401 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 LRRC8BQ6P9F7 803 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 CCDC137Q6PK04 289 aaKnown RBP7.54□□□□□ -1.2
USP16-204ENST00000399976 CEP68Q76N32 757 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 MAATS1Q7Z4T9 603 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 GALNT7Q86SF2 657 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 ZC3H18Q86VM9 953 aaKnown RBP7.54□□□□□ -1.2
USP16-204ENST00000399976 ZSWIM9Q86XI8 627 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 CAMK1DQ8IU85 385 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 LMNTD2Q8IXW0 634 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 TTC30BQ8N4P2 665 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 KIF18AQ8NI77 898 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 GRIN3AQ8TCU5 1115 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 BRSK1Q8TDC3 778 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 OXNAD1Q96HP4 312 aaPredicted RBP7.54□□□□□ -1.2
USP16-204ENST00000399976 KLF6Q99612 283 aaPredicted RBP7.54□□□□□ -1.2
USP16-204ENST00000399976 NAT9Q9BTE0 207 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 TEX101Q9BY14 249 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 SLC17A9Q9BYT1 436 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 VPS18Q9P253 973 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 SLC6A14Q9UN76 642 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 ZNF148Q9UQR1 794 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 CSNK1G3Q9Y6M4 447 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 RALGAPA1Q6GYQ0 2036 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 TRPM6Q9BX84 2022 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 PDE2AO00408 941 aaPredicted RBP7.54□□□□□ -1.2
USP16-204ENST00000399976 CRTAMO95727 393 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 TNNT1P13805 278 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 GM2AP17900 193 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 BCKDHBP21953 392 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 XPAP23025 273 aaPredicted RBP7.54□□□□□ -1.2
USP16-204ENST00000399976 KELP23276 732 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 ACSL1P33121 698 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 PLA2G5P39877 138 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 MORF4L2Q15014 288 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 DENND5AQ6IQ26 1287 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 MTERF4Q7Z6M4 381 aaKnown RBP7.54□□□□□ -1.2
USP16-204ENST00000399976 PGBD3Q8N328 593 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 MPP5Q8N3R9 675 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 CEP112Q8N8E3 955 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.54□□□□□ -1.2
USP16-204ENST00000399976 ZSCAN5AQ9BUG6 496 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 L2HGDHQ9H9P8 463 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 WHRNQ9P202 907 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 ACTL7AQ9Y615 435 aa7.54□□□□□ -1.2
USP16-204ENST00000399976 DNMT3AQ9Y6K1 912 aaPredicted RBP7.54□□□□□ -1.2
USP16-204ENST00000399976 MROH6A6NGR9 719 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 ENC1O14682 589 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 PIGNO95427 931 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 HADHAP40939 763 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 CNGA3Q16281 694 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 HENMT1Q5T8I9 393 aaKnown RBP7.53□□□□□ -1.2
USP16-204ENST00000399976 LYPLAL1Q5VWZ2 237 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 TTC27Q6P3X3 843 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.53□□□□□ -1.2
USP16-204ENST00000399976 MACC1Q6ZN28 852 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 TRAM1L1Q8N609 369 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 BTN2A2Q8WVV5 523 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 MAGOHBQ96A72 148 aaKnown RBP7.53□□□□□ -1.2
USP16-204ENST00000399976 ULK4Q96C45 1275 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 BIRC7Q96CA5 298 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 COX14Q96I36 57 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 TMEM121Q9BTD3 319 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 SAE1Q9UBE0 346 aaPredicted RBP7.53□□□□□ -1.2
USP16-204ENST00000399976 ZNF711Q9Y462 761 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 DGKBQ9Y6T7 804 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 ATG2BQ96BY7 2078 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 C5orf42Q9H799 3197 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 ANTXRLA6NF34 631 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 DNALI1O14645 258 aaPredicted RBP7.53□□□□□ -1.2
USP16-204ENST00000399976 PCDHGA12O60330 932 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 CER1O95813 267 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 GSTA2P09210 222 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 C6P13671 934 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 PSMB4P28070 264 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 RPL22P35268 128 aaKnown RBP7.53□□□□□ -1.2
USP16-204ENST00000399976 CTSKP43235 329 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 GDF10P55107 478 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 ARHGEF7Q14155 803 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 GPR33Q49SQ1 333 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 SIRPB2Q5JXA9 342 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 CRTC1Q6UUV9 634 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 CYS1Q717R9 158 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 TTC7BQ86TV6 843 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 RELL1Q8IUW5 271 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 PPIL6Q8IXY8 311 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 RYBPQ8N488 228 aaPredicted RBP7.53□□□□□ -1.2
USP16-204ENST00000399976 ZNF366Q8N895 744 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 FAM71DQ8N9W8 422 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 OR14C36Q8NHC7 312 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 STYXQ8WUJ0 223 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 AGAP3Q96P47 875 aa7.53□□□□□ -1.2
USP16-204ENST00000399976 GPR174Q9BXC1 333 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms