RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 FCHO1O14526 889 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 RHOCP08134 193 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 SRPRAP08240 638 aaKnown RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ATXN1LP0C7T5 689 aaKnown RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 FDXRP22570 491 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 SERPINB1P30740 379 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 TAS2R39P59534 338 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 MAP7D1Q3KQU3 841 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 N4BP2L1Q5TBK1 243 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 RAPH1Q70E73 1250 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 PHLDB2Q86SQ0 1253 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 CENPLQ8N0S6 344 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF382Q96SR6 550 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 SH3GL1Q99961 368 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 SEMA3CQ99985 751 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 IL21Q9HBE4 155 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 SAE1Q9UBE0 346 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 LRRC42Q9Y546 428 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 CAPN8A6NHC0 703 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 STX7O15400 261 aaKnown RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 NUAK1O60285 661 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 IGSF6O95976 241 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 IMPDH1P20839 514 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 SP100P23497 879 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 TRAP1Q12931 704 aaKnown RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ZBTB17Q13105 803 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 PCBP2Q15366 365 aaKnown RBP eCLIP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 RTP2Q5QGT7 225 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ANKS6Q68DC2 871 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 NET1Q7Z628 596 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 KIAA0907Q7Z7F0 614 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 MSANTD3Q96H12 275 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 RTKNQ9BST9 563 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 C20orf96Q9NUD7 363 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 HOXC11O43248 304 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 CAPNS1P04632 268 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 RAG1P15918 1043 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 CASP2P42575 452 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 GSTM5P46439 218 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF140P52738 457 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 RNF169Q8NCN4 708 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 C7orf57Q8NEG2 295 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 GPR62Q9BZJ7 368 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ABCB8Q9NUT2 735 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 GMIPQ9P107 970 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 OBSL1O75147 1896 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 FGF3P11487 239 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 GLDCP23378 1020 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 GSTM2P28161 218 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 CCND3P30281 292 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 NSG1P42857 185 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 MRPS35P82673 323 aaKnown RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 LBRQ14739 615 aaKnown RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 NAA25Q14CX7 972 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 AASDHQ4L235 1098 aaPredicted RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF470Q6ECI4 717 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 GPRIN1Q7Z2K8 1008 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 GPIHBP1Q8IV16 184 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ATAD1Q8NBU5 361 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 OR13J1Q8NGT2 312 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 MDM1Q8TC05 714 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 ZBP1Q9H171 429 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 KLHL11Q9NVR0 708 aa5.88□□□□□ -1.47
PTPRD-206ENST00000397617 AGO1Q9UL18 857 aaKnown RBP5.88□□□□□ -1.47
PTPRD-206ENST00000397617 CKAP5Q14008 2032 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 HLA-DQB2P05538 268 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 IFI6P09912 130 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ELNP15502 786 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 NNMTP40261 264 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 MTTPP55157 894 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 C21orf58P58505 322 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 MRPS25P82663 173 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 SMAD3P84022 425 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 HSF5Q4G112 596 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 HSP90AA5PQ58FG0 334 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 C16orf89Q6UX73 402 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 RASGRP3Q8IV61 690 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 IGDCC3Q8IVU1 814 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 OR2AP1Q8NGE2 309 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 CLEC4CQ8WTT0 213 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ASB12Q8WXK4 309 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 HOPXQ9BPY8 73 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 AARSD1Q9BTE6 412 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 TRIM54Q9BYV2 358 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 NUDT4Q9NZJ9 180 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ANGPTL2Q9UKU9 493 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 TRIM17Q9Y577 477 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 ZNF106Q9H2Y7 1883 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 PLXNA4Q9HCM2 1894 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 FAM95CA0A1B0GW59 222 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 SMIM24O75264 130 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 POP4O95707 220 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 PKMP14618 531 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 EFEMP1Q12805 493 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 EPS8Q12929 822 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 GGTA1PQ4G0N0 100 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 TECRLQ5HYJ1 363 aa5.87□□□□□ -1.47
PTPRD-206ENST00000397617 SAMD4BQ5PRF9 694 aaKnown RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 DNAJB7Q7Z6W7 309 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-206ENST00000397617 FIBCD1Q8N539 461 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms