RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 FRYLO94915 3013 aa19.26■□□□□ 0.67
HOXA9-202ENST00000396345 LRRK1Q38SD2 2015 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 PI4KAP42356 2102 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 CAPN8A6NHC0 703 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 PHF2O75151 1096 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 HEXIM1O94992 359 aaKnown RBP19.25■□□□□ 0.67
HOXA9-202ENST00000396345 CFIP05156 583 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 ZNF806P0C7X5 589 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 HNRNPA2B1P22626 353 aaKnown RBP19.25■□□□□ 0.67
HOXA9-202ENST00000396345 AKT2P31751 481 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 COILP38432 576 aaPredicted RBP19.25■□□□□ 0.67
HOXA9-202ENST00000396345 PAFAH1B1P43034 410 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 LMNB2Q03252 620 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 CNGA3Q16281 694 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 TRIM61Q5EBN2 209 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 TTC27Q6P3X3 843 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 CRTC1Q6UUV9 634 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 PRUNE1Q86TP1 453 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 TSPAN33Q86UF1 283 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 TAB3Q8N5C8 712 aaPredicted RBP19.25■□□□□ 0.67
HOXA9-202ENST00000396345 SLC25A41Q8N5S1 370 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 LENG8Q96PV6 779 aaPredicted RBP19.25■□□□□ 0.67
HOXA9-202ENST00000396345 MYOCQ99972 504 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 FICDQ9BVA6 458 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 C1QTNF7Q9BXJ2 289 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 FZD3Q9NPG1 666 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 SEMA4GQ9NTN9 838 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 PAK5Q9P286 719 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 RNF14Q9UBS8 474 aa19.25■□□□□ 0.67
HOXA9-202ENST00000396345 PATE3B3GLJ2 98 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 WNT9AO14904 365 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 KHNYNO15037 678 aaKnown RBP19.24■□□□□ 0.67
HOXA9-202ENST00000396345 AGTP01019 485 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 ATXN1LP0C7T5 689 aaKnown RBP19.24■□□□□ 0.67
HOXA9-202ENST00000396345 ZSCAN5DPP0CG00 497 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 LHCGRP22888 699 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 FDFT1P37268 417 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 AFF3P51826 1226 aaKnown RBP19.24■□□□□ 0.67
HOXA9-202ENST00000396345 STAT4Q14765 748 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 ACOX1Q15067 660 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 SLC1A5Q15758 541 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 CSRP2Q16527 193 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 SIRPB2Q5JXA9 342 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 FAXCQ5TGI0 409 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 DENND2CQ68D51 928 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 SLC23A3Q6PIS1 610 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 CCDC137Q6PK04 289 aaKnown RBP19.24■□□□□ 0.67
HOXA9-202ENST00000396345 KLHDC8BQ8IXV7 354 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 GLIS1Q8NBF1 620 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 LRRC45Q96CN5 670 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 LYSMD1Q96S90 227 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 PARD6AQ9NPB6 346 aa19.24■□□□□ 0.67
HOXA9-202ENST00000396345 ZNF292O60281 2723 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 A0A0U1RQS6 177 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 PSMD11O00231 422 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 RAD51BO15315 384 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 PSMD3O43242 534 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 ZNF30P17039 623 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 HLA-DPA1P20036 260 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 CD38P28907 300 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 RPL22P35268 128 aaKnown RBP19.23■□□□□ 0.67
HOXA9-202ENST00000396345 ADRA1AP35348 466 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 FNTAP49354 379 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 CSNK1EP49674 416 aaKnown RBP19.23■□□□□ 0.67
HOXA9-202ENST00000396345 AGERQ15109 404 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 TEAD4Q15561 434 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 LRRC66Q68CR7 880 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 C4orf22Q6V702 233 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 TMEM145Q8NBT3 493 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 KLF6Q99612 283 aaPredicted RBP19.23■□□□□ 0.67
HOXA9-202ENST00000396345 TBL1YQ9BQ87 522 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 NUSAP1Q9BXS6 441 aaKnown RBP19.23■□□□□ 0.67
HOXA9-202ENST00000396345 ETNK1Q9HBU6 452 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 SLC6A14Q9UN76 642 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 CA5BQ9Y2D0 317 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 HS3ST3A1Q9Y663 406 aa19.23■□□□□ 0.67
HOXA9-202ENST00000396345 FAM186AA6NE01 2351 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 C1orf232A0A0U1RR37 186 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 GOLGA8CPA6NN73 597 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 PDE2AO00408 941 aaPredicted RBP19.22■□□□□ 0.67
HOXA9-202ENST00000396345 RECQL5O94762 991 aaPredicted RBP19.22■□□□□ 0.67
HOXA9-202ENST00000396345 CLDN7O95471 211 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 TUBB4AP04350 444 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 FGF1P05230 155 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 PIRTP0C851 137 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 TGM1P22735 817 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 CHRNA4P43681 627 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 PTSQ03393 145 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 OLIG2Q13516 323 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 SPARCL1Q14515 664 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 LRRC14Q15048 493 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 SF3A2Q15428 464 aaKnown RBP19.22■□□□□ 0.67
HOXA9-202ENST00000396345 KCTD11Q693B1 232 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 TCEAL6Q6IPX3 200 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 RANBP10Q6VN20 620 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 HSD11B1LQ7Z5J1 315 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 CBARPQ8N350 705 aaPredicted RBP19.22■□□□□ 0.67
HOXA9-202ENST00000396345 DENND6BQ8NEG7 585 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 GRK7Q8WTQ7 553 aa19.22■□□□□ 0.67
HOXA9-202ENST00000396345 TCEAL3Q969E4 200 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms