RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 INO80DQ53TQ3 878 aaPredicted RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 DCAF6Q58WW2 860 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 MS4A13Q5J8X5 152 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PIK3R6Q5UE93 754 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 NAPEPLDQ6IQ20 393 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 MPP5Q8N3R9 675 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 DNAJC5GQ8N7S2 189 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 COLGALT1Q8NBJ5 622 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 FBXO36Q8NEA4 188 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ACTRT2Q8TDY3 377 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PYROXD1Q8WU10 500 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 BCL7CQ8WUZ0 217 aaPredicted RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 HSPH1Q92598 858 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PSMG2Q969U7 264 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 VOPP1Q96AW1 172 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ISG20Q96AZ6 181 aaKnown RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 DCUN1D1Q96GG9 259 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 LYSMD1Q96S90 227 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 KCNK16Q96T55 309 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 C1QTNF3Q9BXJ4 246 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 MRPL1Q9BYD6 325 aaKnown RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 SLC2A11Q9BYW1 496 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 OSBPL6Q9BZF3 934 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ZYG11BQ9C0D3 744 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 NDEL1Q9GZM8 345 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TGIF2Q9GZN2 237 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 LATS2Q9NRM7 1088 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 MAD1L1Q9Y6D9 718 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TSPAN11A1L157 253 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 FUOMA2VDF0 154 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 E9PAM4 449 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 FAM72CH0Y354 149 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 KCNN4O15554 427 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 KDELR3O43731 214 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CRTAMO95727 393 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 F11P03951 625 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CLTBP09497 229 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ZSCAN5DPP0CG00 497 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 MYL4P12829 197 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 BGNP21810 368 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 YWHAQP27348 245 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ADSLP30566 484 aaPredicted RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 ALDH3B2P48448 385 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TPI1P60174 286 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 IKBKEQ14164 716 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TRIP10Q15642 601 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 SEPT7Q16181 437 aaKnown RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 ZNF423Q2M1K9 1284 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TYSND1Q2T9J0 566 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 KCNT1Q5JUK3 1230 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 FAM72AQ5TYM5 149 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 FAM72DQ6L9T8 149 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 HTR3DQ70Z44 454 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CTU1Q7Z7A3 348 aaKnown RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 TMEM150AQ86TG1 271 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PRPF39Q86UA1 669 aaKnown RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 FAM72BQ86X60 149 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 RASGRP3Q8IV61 690 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 KDM1BQ8NB78 822 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ZNF784Q8NCA9 323 aaPredicted RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 CASP10Q92851 521 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 SGF29Q96ES7 293 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 COX4I2Q96KJ9 171 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 GCNAQ96QF7 691 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PPP1R16BQ96T49 567 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PAFAH2Q99487 392 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 GPR22Q99680 433 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 NEURL2Q9BR09 285 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 WWP1Q9H0M0 922 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PRDM12Q9H4Q4 367 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 Q9H521 79 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 VPS37BQ9H9H4 285 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 NMUR1Q9HB89 426 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 NPDC1Q9NQX5 325 aaPredicted RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 C6orf203Q9P0P8 240 aaPredicted RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 PLLPQ9Y342 182 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 MFHAS1Q9Y4C4 1052 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 DTNAQ9Y4J8 743 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ZNF840PA6NDX5 716 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CAPN8A6NHC0 703 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CASTOR2A6NHX0 329 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PRR5-ARHGAP8B1AHC4 643 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 TMEM114B3SHH9 223 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 PAGE1O75459 146 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 SNRPAP09012 282 aaKnown RBP5.39□□□□□ -1.55
VPS41-203ENST00000395969 USP17L7P0C7H9 530 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 CTSAP10619 480 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ETS1P14921 441 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 RAG1P15918 1043 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ZNF23P17027 643 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ELK3P41970 407 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 BRCC3P46736 316 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ALDH1A3P47895 512 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 RXRGP48443 463 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 LIMK2P53671 638 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ARHGAP8P85298 464 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 ORC1Q13415 861 aa5.39□□□□□ -1.55
VPS41-203ENST00000395969 EFTUD2Q15029 972 aaKnown RBP eCLIP5.39□□□□□ -1.551e-6■■■■■ 30.5
VPS41-203ENST00000395969 SMTNL2Q2TAL5 461 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms