RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 NCANO14594 1321 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 GRIN2DO15399 1336 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 TMEM120BA0PK00 339 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 SCAMP1O15126 338 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 COCHO43405 550 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 LIASO43766 372 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 KLHL2O95198 593 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 JMJD7P0C870 316 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 HLA-EP13747 358 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 ALDH18A1P54886 795 aaKnown RBP12.88□□□□□ -0.35
CAST-206ENST00000395812 SOX4Q06945 474 aaPredicted RBP12.88□□□□□ -0.35
CAST-206ENST00000395812 PGS1Q32NB8 556 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 RHBDF2Q6PJF5 856 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 REXO1L1PQ8IX06 675 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 SRFBP1Q8NEF9 429 aaKnown RBP12.88□□□□□ -0.35
CAST-206ENST00000395812 ZFYVE19Q96K21 471 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 ASB2Q96Q27 587 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 HGH1Q9BTY7 390 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 TLR10Q9BXR5 811 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 DPY30Q9C005 99 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 STRADBQ9C0K7 418 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 ABCG8Q9H221 673 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 SIRPGQ9P1W8 387 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 OR10H1Q9Y4A9 318 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 SNX8Q9Y5X2 465 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 TMEM265A0A087WTH1 108 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 SEC22BO75396 215 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 RPP40O75818 363 aaKnown RBP12.88□□□□□ -0.35
CAST-206ENST00000395812 ENO3P13929 434 aaPredicted RBP12.88□□□□□ -0.35
CAST-206ENST00000395812 SSTR1P30872 391 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 DHCR24Q15392 516 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 ATP13A5Q4VNC0 1218 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 ATP6AP1LQ52LC2 224 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 LDLRAP1Q5SW96 308 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 NXPE3Q969Y0 559 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 RAD51AP1Q96B01 352 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 PRICKLE1Q96MT3 831 aaPredicted RBP12.88□□□□□ -0.35
CAST-206ENST00000395812 TWNKQ96RR1 684 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 SIX4Q9UIU6 781 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 TMCO1Q9UM00 188 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 SNX6Q9UNH7 406 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 HNRNPCL2B2RXH8 293 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 B4DGG1 531 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 RFXAPO00287 272 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 HNRNPCL1O60812 293 aaKnown RBP12.88□□□□□ -0.35
CAST-206ENST00000395812 USP1O94782 785 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 CMPK1P30085 196 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 GNPDA1P46926 289 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 ATP6V0D1P61421 351 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 CACNG1Q06432 222 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 INCA1Q0VD86 236 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 STX5Q13190 355 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 ZSCAN26Q16670 478 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 TMEM220Q6QAJ8 160 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 NOA1Q8NC60 698 aaKnown RBP12.88□□□□□ -0.35
CAST-206ENST00000395812 CLEC4CQ8WTT0 213 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 GPR174Q9BXC1 333 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 SRMSQ9H3Y6 488 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 MANSC1Q9H8J5 431 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 SNX10Q9Y5X0 201 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 TRIOBPQ9H2D6 2365 aa12.88□□□□□ -0.35
CAST-206ENST00000395812 A0A087X1B8 175 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 KRT87PA6NCN2 255 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 ZNF840PA6NDX5 716 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 IFNA14P01570 189 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 ITGB1P05556 798 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 UQCRBP14927 111 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 EEF1B2P24534 225 aaKnown RBP12.87□□□□□ -0.35
CAST-206ENST00000395812 PLEKHG6Q3KR16 790 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 MINDY4Q4G0A6 757 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 UBXN11Q5T124 520 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 FBXW10Q5XX13 1052 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 ICE2Q659A1 982 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 BBS7Q8IWZ6 715 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 ZFP28Q8NHY6 868 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 AIF1LQ9BQI0 150 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 FNIP2Q9P278 1114 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 GMNCA6NCL1 334 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 MEIS3P2A8K0S8 358 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 PHGDHO43175 533 aaKnown RBP12.87□□□□□ -0.35
CAST-206ENST00000395812 LTA4HP09960 611 aaKnown RBP12.87□□□□□ -0.35
CAST-206ENST00000395812 PKMP14618 531 aaKnown RBP12.87□□□□□ -0.35
CAST-206ENST00000395812 PFKLP17858 780 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 HNRNPH3P31942 346 aaKnown RBP12.87□□□□□ -0.35
CAST-206ENST00000395812 PRKAA2P54646 552 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 NOMO1Q15155 1222 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 DAB2IPQ5VWQ8 1189 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 CAMK1DQ8IU85 385 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 TXNDC5Q8NBS9 432 aaKnown RBP12.87□□□□□ -0.35
CAST-206ENST00000395812 LMX1AQ8TE12 382 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 MYLIPQ8WY64 445 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 PAAF1Q9BRP4 392 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 MID1IP1Q9NPA3 183 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 TEKT2Q9UIF3 430 aa12.87□□□□□ -0.35
CAST-206ENST00000395812 ZSCAN5DPP0CG00 497 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms