RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PLA2G2AP14555 144 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 XPAP23025 273 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-205ENST00000394892 GJC1P36383 396 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 PEX5P50542 639 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 THOP1P52888 689 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 SRP54P61011 504 aaKnown RBP8.88□□□□□ -0.99
ATG4A-205ENST00000394892 GALNT2Q10471 571 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 MTM1Q13496 603 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 GRM3Q14832 879 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 TAF1BQ53T94 588 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-205ENST00000394892 ANKRD20A8PQ5CZ79 823 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 C6orf132Q5T0Z8 1188 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 FAXCQ5TGI0 409 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 SPECC1LQ69YQ0 1117 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 ALG1LQ6GMV1 187 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 ZCCHC8Q6NZY4 707 aaKnown RBP8.88□□□□□ -0.99
ATG4A-205ENST00000394892 ERAP2Q6P179 960 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 ENPP7Q6UWV6 458 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 EFL1Q7Z2Z2 1120 aaKnown RBP8.88□□□□□ -0.99
ATG4A-205ENST00000394892 TECPR1Q7Z6L1 1165 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 HID1Q8IV36 788 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 CNTD1Q8N815 330 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 KYQ8NBH2 561 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 OR8K1Q8NGG5 319 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 IQCDQ96DY2 449 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 PRR11Q96HE9 360 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-205ENST00000394892 TBATAQ96M53 351 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 MCCC1Q96RQ3 725 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-205ENST00000394892 LGMNQ99538 433 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 NT5MQ9NPB1 228 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 DONSONQ9NYP3 566 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 CTTNBP2NLQ9P2B4 639 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 RCOR3Q9P2K3 495 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-205ENST00000394892 SPASTQ9UBP0 616 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 PPIL1Q9Y3C6 166 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 RAI2Q9Y5P3 530 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 TRPM6Q9BX84 2022 aa8.88□□□□□ -0.99
ATG4A-205ENST00000394892 GCN1Q92616 2671 aaKnown RBP8.87□□□□□ -0.99
ATG4A-205ENST00000394892 SSU72P8A0A1W2PR75 194 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 NEMP2A6NFY4 417 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 TOR1BO14657 336 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 NOBOXO60393 691 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 MFAP3LO75121 409 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 CSO75390 466 aaKnown RBP8.87□□□□□ -0.99
ATG4A-205ENST00000394892 GP1BAP07359 652 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 MMP2P08253 660 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 ALPIP09923 528 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 TMEM253P0C7T8 217 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 DESP17661 470 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 CTPS1P17812 591 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 KDELR1P24390 212 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 VIPR1P32241 457 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 ETV3P41162 512 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 GARSP41250 739 aaKnown RBP8.87□□□□□ -0.99
ATG4A-205ENST00000394892 MMP13P45452 471 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 RENBPP51606 427 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 UCNP55089 124 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 KIAA1024LP59773 190 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 TPM4P67936 248 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 CXADRP78310 365 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 DSC2Q02487 901 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 PPARDQ03181 441 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 CFHR1Q03591 330 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 CCDC173Q0VFZ6 552 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 ZNF235Q14590 738 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 ESRP1Q6NXG1 681 aaKnown RBP8.87□□□□□ -0.99
ATG4A-205ENST00000394892 PNCKQ6P2M8 343 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 Q6ZVL8 140 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 B4GALNT4Q76KP1 1039 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 RD3Q7Z3Z2 195 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 NRROSQ86YC3 692 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 LSMEM2Q8N112 164 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 ATPAF2Q8N5M1 289 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 PLD5Q8N7P1 536 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 ZNF248Q8NDW4 579 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 SLC35G2Q8TBE7 412 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 WDR92Q96MX6 357 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 TSGA13Q96PP4 275 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 WDR24Q96S15 920 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 RBM15Q96T37 977 aaKnown RBP eCLIP8.87□□□□□ -0.99
ATG4A-205ENST00000394892 AGAP2Q99490 1192 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 SEMA3CQ99985 751 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 DUSP23Q9BVJ7 150 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 TMEM168Q9H0V1 697 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 ABHD10Q9NUJ1 306 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 EVA1BQ9NVM1 165 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 DTLQ9NZJ0 730 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 UVRAGQ9P2Y5 699 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 TFR2Q9UP52 801 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 HYOU1Q9Y4L1 999 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 PCYT1BQ9Y5K3 369 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-205ENST00000394892 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.87□□□□□ -0.99
ATG4A-205ENST00000394892 DGKBQ9Y6T7 804 aa8.87□□□□□ -0.99
ATG4A-205ENST00000394892 COL27A1Q8IZC6 1860 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-205ENST00000394892 TP53BP1Q12888 1972 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-205ENST00000394892 A0A1W2PQM1 296 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 TMEM110-MUSTN1A8MSY1 372 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 H3BM21 787 aa8.86□□□□□ -0.99
ATG4A-205ENST00000394892 J3QKU1 62 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms