RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 IL18RAPO95256 599 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 HGFP14210 728 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 SHMT2P34897 504 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 TIGD2Q4W5G0 525 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 BNIPLQ7Z465 357 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 CADM3Q8N126 398 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 ANKRD52Q8NB46 1076 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 PPM1MQ96MI6 270 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 DEFB129Q9H1M3 183 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 RHOJQ9H4E5 214 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 RAD21L1Q9H4I0 556 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 ALG2Q9H553 416 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 SMPD3Q9NY59 655 aaPredicted RBP16.41■□□□□ 0.22
PHTF1-205ENST00000393357 UTP6Q9NYH9 597 aaKnown RBP16.41■□□□□ 0.22
PHTF1-205ENST00000393357 INVSQ9Y283 1065 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 A8MT66 165 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 UBFD1O14562 309 aaKnown RBP16.41■□□□□ 0.22
PHTF1-205ENST00000393357 CNOT3O75175 753 aaKnown RBP16.41■□□□□ 0.22
PHTF1-205ENST00000393357 C8BP07358 591 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 MBTD1Q05BQ5 628 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 MADCAM1Q13477 382 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 R3HCC1LQ7Z5L2 792 aaKnown RBP16.41■□□□□ 0.22
PHTF1-205ENST00000393357 TMEM135Q86UB9 458 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 SLCO6A1Q86UG4 719 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 RDH11Q8TC12 318 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 ZFP90Q8TF47 636 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 PABPC5Q96DU9 382 aaKnown RBP16.41■□□□□ 0.22
PHTF1-205ENST00000393357 OLFM1Q99784 485 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 TBCDQ9BTW9 1192 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 C1QTNF1Q9BXJ1 281 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 MID2Q9UJV3 735 aa16.41■□□□□ 0.22
PHTF1-205ENST00000393357 EVPLQ92817 2033 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 BTAF1O14981 1849 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 SLX4Q8IY92 1834 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 TRIM24O15164 1050 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 XPNPEP2O43895 674 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 NPM3O75607 178 aaKnown RBP16.4■□□□□ 0.22
PHTF1-205ENST00000393357 TKTP29401 623 aaKnown RBP16.4■□□□□ 0.22
PHTF1-205ENST00000393357 PRKAA2P54646 552 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 YWHAHQ04917 246 aaPredicted RBP16.4■□□□□ 0.22
PHTF1-205ENST00000393357 AAK1Q2M2I8 961 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 KIAA2013Q8IYS2 634 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 TNIP2Q8NFZ5 429 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 KCTD14Q9BQ13 255 aaPredicted RBP16.4■□□□□ 0.22
PHTF1-205ENST00000393357 CMTM6Q9NX76 183 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 NDUFAF1Q9Y375 327 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 KIAA1217Q5T5P2 1943 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 TCRBV3S1A0A5B6 114 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 PIP5K1BO14986 540 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 USP17L7P0C7H9 530 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 INSRRP14616 1297 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 TUBA4AP68366 448 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 MTA1Q13330 715 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 TARBP2Q15633 366 aaKnown RBP16.4■□□□□ 0.22
PHTF1-205ENST00000393357 KCNJ8Q15842 424 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 USP41Q3LFD5 358 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 PCYOX1LQ8NBM8 494 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 RHOBTB2Q9BYZ6 727 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 MYOZ2Q9NPC6 264 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 FZD10Q9ULW2 581 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 PADI4Q9UM07 663 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 ATP11BQ9Y2G3 1177 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 A0A1B0GTL3 188 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
PHTF1-205ENST00000393357 INMTO95050 263 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 VBP1P61758 197 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 CXCL9Q07325 125 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 SQLEQ14534 574 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 ABHD11Q8NFV4 315 aa16.4■□□□□ 0.22
PHTF1-205ENST00000393357 NIFKQ9BYG3 293 aaKnown RBP16.4■□□□□ 0.22
PHTF1-205ENST00000393357 PDGFDQ9GZP0 370 aaPredicted RBP16.4■□□□□ 0.22
PHTF1-205ENST00000393357 SHROOM3Q8TF72 1996 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 NUP214P35658 2090 aaPredicted RBP16.39■□□□□ 0.21
PHTF1-205ENST00000393357 I6L893 689 aaPredicted RBP16.39■□□□□ 0.21
PHTF1-205ENST00000393357 APBA3O96018 575 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 GFAPP14136 432 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 YBX3P16989 372 aaKnown RBP eCLIP16.39■□□□□ 0.21
PHTF1-205ENST00000393357 MTPNP58546 118 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 PAN2Q504Q3 1202 aaKnown RBP16.39■□□□□ 0.21
PHTF1-205ENST00000393357 GALNT5Q7Z7M9 940 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 LGI2Q8N0V4 545 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 CPSF7Q8N684 471 aaKnown RBP16.39■□□□□ 0.21
PHTF1-205ENST00000393357 SEPT8Q92599 483 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 CAMKK2Q96RR4 588 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 GPR22Q99680 433 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 C9orf16Q9BUW7 83 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 PDZD7Q9H5P4 517 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 MAP10Q9P2G4 905 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 CPB1P15086 417 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 ZNF12P17014 697 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 HPCAL1P37235 193 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 MAPRE2Q15555 327 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 MOGQ16653 247 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 ZCCHC7Q8N3Z6 543 aaKnown RBP16.39■□□□□ 0.21
PHTF1-205ENST00000393357 FLAD1Q8NFF5 587 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 TEX37Q96LM6 180 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 ACOX2Q99424 681 aa16.39■□□□□ 0.21
PHTF1-205ENST00000393357 HNRNPABQ99729 332 aaKnown RBP16.39■□□□□ 0.21
PHTF1-205ENST00000393357 SYCE1LA8MT33 242 aa16.38■□□□□ 0.21
PHTF1-205ENST00000393357 M0R3G1 203 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms