RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 PRAMEF2O60811 474 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 DNAJB5O75953 348 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 RSL1D1O76021 490 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 GH1P01241 217 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SKILP12757 684 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 EPHA3P29320 983 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 PTPN9P43378 593 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 DHPSP49366 369 aaPredicted RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 KIAA1024LP59773 190 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 RBM6P78332 1123 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 AIMP2Q13155 320 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 PCLAFQ15004 111 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 LEXMQ3ZCV2 418 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 AASDHQ4L235 1098 aaPredicted RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 C12orf60Q5U649 245 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 MTSS1LQ765P7 747 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 TRIM46Q7Z4K8 759 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 NRROSQ86YC3 692 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 POU5F2Q8N7G0 328 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 PSD4Q8NDX1 1056 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SRFBP1Q8NEF9 429 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 PNPT1Q8TCS8 783 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 EDARADDQ8WWZ3 215 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 MASTLQ96GX5 879 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ZNF396Q96N95 335 aaPredicted RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 CLIC6Q96NY7 704 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 NR1H4Q96RI1 486 aaPredicted RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 AKTIPQ9H8T0 292 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 UBTD1Q9HAC8 227 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 FANCEQ9HB96 536 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 TMEM8AQ9HCN3 771 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 PSD3Q9NYI0 1048 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SUN2Q9UH99 717 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 FBXW11Q9UKB1 542 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SNX7Q9UNH6 387 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 PRR5-ARHGAP8B1AHC4 643 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 AKAP3O75969 853 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 TOX4O94842 621 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 RHOBTB1O94844 696 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 PGLSO95336 258 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 C8orf89P0DMQ9 161 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 GABRB1P18505 474 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ACAA2P42765 397 aaKnown RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 GCLCP48506 637 aaPredicted RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 CLCN3P51790 818 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 COG7P83436 770 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CBX1P83916 185 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 FPGSQ05932 587 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ABRQ12979 859 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ITGB3BPQ13352 177 aaPredicted RBP3.58□□□□□ -1.84
XRN1-202ENST00000392981 CCNIQ14094 377 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CMPK2Q5EBM0 449 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ZRANB3Q5FWF4 1079 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 FAM91A1Q658Y4 838 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 SHISA2Q6UWI4 295 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 DPY19L3Q6ZPD9 716 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 CHSY3Q70JA7 882 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 FAM83AQ86UY5 434 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 IGDCC4Q8TDY8 1250 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ORAI1Q96D31 301 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 ACSS3Q9H6R3 686 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 IL16Q14005 1332 aa3.58□□□□□ -1.84
XRN1-202ENST00000392981 GOLGA8OA6NCC3 632 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FAM90A18PA6NE21 464 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FAM90A16PA6NEW6 464 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FAM90A9PA6NNJ1 464 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FAM90A5PA8MXJ8 464 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 GOLGA8NF8WBI6 632 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 M0QX08 132 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FAM90A15PP0C7V4 464 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FAM90A14PP0C7W9 464 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ACHEP22303 614 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 LRPAP1P30533 357 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 WNT5AP41221 380 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 NPBWR1P48145 328 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SERPINH1P50454 418 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 TAS2R50P59544 299 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 NIPAL4Q0D2K0 466 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 CCDC15Q0P6D6 951 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PMPCAQ10713 525 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TUBB2AQ13885 445 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 KRT24Q2M2I5 525 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 HYAL4Q2M3T9 481 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 RNASEH2BQ5TBB1 312 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 SERTAD4-AS1Q5TG53 156 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ATF7IP2Q5U623 682 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ATG9BQ674R7 924 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 LCTLQ6UWM7 567 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ENPP7Q6UWV6 458 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 BMP8AQ7Z5Y6 402 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TMCO2Q7Z6W1 182 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 LILRA2Q8N149 483 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 EIF1ADQ8N9N8 165 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 METTL21AQ8WXB1 218 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 VWCEQ96DN2 955 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 CCDC51Q96ER9 411 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 MMABQ96EY8 250 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 TPD52L3Q96J77 140 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ZBTB18Q99592 522 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 CRACR2AQ9BSW2 395 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms