RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PPP2R2DQ66LE6 453 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 MBLAC2Q68D91 279 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 AFTPHQ6ULP2 937 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 KIAA0907Q7Z7F0 614 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CEP97Q8IW35 865 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 C12orf76Q8N812 135 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 OR4K2Q8NGD2 314 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 OR2AP1Q8NGE2 309 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 ZNF398Q8TD17 642 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 PIH1D2Q8WWB5 315 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CCT6BQ92526 530 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CDCA3Q99618 268 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 SLC2A11Q9BYW1 496 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CEP44Q9C0F1 390 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 NKX2-4Q9H2Z4 354 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 NMRAL1Q9HBL8 299 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 MAGEE1Q9HCI5 957 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CATSPERZQ9NTU4 200 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 EVLQ9UI08 416 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 SLC25A13Q9UJS0 675 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CORO1CQ9ULV4 474 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 ACOT9Q9Y305 439 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 WNT6Q9Y6F9 365 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 SNNO75324 88 aaPredicted RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 TROVE2P10155 538 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 SAT1P21673 171 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 EPHB1P54762 984 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 SLC12A2P55011 1212 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 TAS2R39P59534 338 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 SNRPD1P62314 119 aaKnown RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 RAB30Q15771 203 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 RBM20Q5T481 1227 aaKnown RBP11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 TMC5Q6UXY8 1006 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CCDC121Q6ZUS5 278 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 TRPM8Q7Z2W7 1104 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CCDC91Q7Z6B0 441 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 CAMK1DQ8IU85 385 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 TTC30BQ8N4P2 665 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 VN1R2Q8NFZ6 395 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 GDPD5Q8WTR4 605 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 TSPAN17Q96FV3 270 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 TSNARE1Q96NA8 513 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 KDM4CQ9H3R0 1056 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 ATP13A3Q9H7F0 1226 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 DZANK1Q9NVP4 752 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 MSRAQ9UJ68 235 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 MID2Q9UJV3 735 aa11.47□□□□□ -0.57
SMARCAL1-203ENST00000392128 SCN8AQ9UQD0 1980 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 ZNF106Q9H2Y7 1883 aaKnown RBP11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 FGF3P11487 239 aaPredicted RBP11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 CPA3P15088 417 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 HOXB8P17481 243 aaPredicted RBP11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 ABL2P42684 1182 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 STK19P49842 368 aaPredicted RBP11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 STC1P52823 247 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 OCRLQ01968 901 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 CES4AQ5XG92 561 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 C22orf39Q6P5X5 142 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 SDCCAG8Q86SQ7 713 aaPredicted RBP11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 CENPLQ8N0S6 344 aaPredicted RBP11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 EFHBQ8N7U6 833 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 RDH11Q8TC12 318 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 C10orf82Q8WW14 230 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 RPL10LQ96L21 214 aaKnown RBP11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 SMIM14Q96QK8 99 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 TUBGCP5Q96RT8 1024 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 C19orf43Q9BQ61 176 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 TNKS2Q9H2K2 1166 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 INTS10Q9NVR2 710 aaKnown RBP11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 POLR3BQ9NW08 1133 aaPredicted RBP11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 PDE4DIPQ5VU43 2346 aa11.46□□□□□ -0.57
SMARCAL1-203ENST00000392128 TRANK1O15050 2925 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 H7C0S8 307 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 ECT2LQ008S8 904 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 STX3Q13277 289 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 SEMA3AQ14563 771 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 TSNAXIP1Q2TAA8 658 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 HECTD2Q5U5R9 776 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 FAM45BPQ6NSW5 357 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 LDB1Q86U70 411 aaPredicted RBP11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 ADIPOR2Q86V24 386 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 C10orf107Q8IVU9 208 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 AHI1Q8N157 1196 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 PCDH20Q8N6Y1 951 aaKnown RBP11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 OR6K2Q8NGY2 324 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 FAM45AQ8TCE6 357 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 OSCP1Q8WVF1 389 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 LRRC3BQ96PB8 259 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 NDNQ99608 321 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 TRIM55Q9BYV6 548 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 NPHS2Q9NP85 383 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 THAP1Q9NVV9 213 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 FBXO10Q9UK96 956 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 VWA7Q9Y334 891 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 RRP15Q9Y3B9 282 aaKnown RBP11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 ZNF711Q9Y462 761 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 USH1CQ9Y6N9 552 aa11.46□□□□□ -0.58
SMARCAL1-203ENST00000392128 G3V2L1 256 aa11.45□□□□□ -0.58
SMARCAL1-203ENST00000392128 STX7O15400 261 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms