RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 GPR158Q5T848 1215 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 FAM171A1Q5VUB5 890 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 BRSK1Q8TDC3 778 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 GPR152Q8TDT2 470 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 TBATAQ96M53 351 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 MRPL1Q9BYD6 325 aaKnown RBP14.99□□□□□ -0.01
SCFD2-201ENST00000388940 FAM192AQ9GZU8 254 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 ELAC1Q9H777 363 aaKnown RBP14.99□□□□□ -0.01
SCFD2-201ENST00000388940 TNFRSF12AQ9NP84 129 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCFD2-201ENST00000388940 SARDHQ9UL12 918 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 TRAF6Q9Y4K3 522 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 KCTD3Q9Y597 815 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 TLL2Q9Y6L7 1015 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 ANKRD36A6QL64 1941 aa14.99□□□□□ -0.01
SCFD2-201ENST00000388940 ACOT8O14734 319 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 UBDO15205 165 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 CD3EAPO15446 510 aaKnown RBP14.98□□□□□ -0.01
SCFD2-201ENST00000388940 CFLARO15519 480 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 RPP40O75818 363 aaKnown RBP14.98□□□□□ -0.01
SCFD2-201ENST00000388940 VCLP18206 1134 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 OGNP20774 298 aaKnown RBP14.98□□□□□ -0.01
SCFD2-201ENST00000388940 TACR2P21452 398 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 ACVRL1P37023 503 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 ETFBP38117 255 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 ALDH1A3P47895 512 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 ATP4BP51164 291 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 AQP4P55087 323 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 C1QTNF8P60827 252 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 MS4A2Q01362 244 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 LRRC36Q1X8D7 754 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 NADSYN1Q6IA69 706 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 MRNIPQ6NTE8 343 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 PHF21BQ96EK2 531 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 ASB2Q96Q27 587 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 NPAS2Q99743 824 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 HACD3Q9P035 362 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 PACSIN3Q9UKS6 424 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 OR51F1A6NGY5 319 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 TRIM38O00635 465 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 TBC1D4O60343 1298 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 RNASEH1O60930 286 aaKnown RBP14.98□□□□□ -0.01
SCFD2-201ENST00000388940 GOT2P00505 430 aaKnown RBP14.98□□□□□ -0.01
SCFD2-201ENST00000388940 CAPNS1P04632 268 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 CD1DP15813 335 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 KCNC1P48547 511 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 ZNF235Q14590 738 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 ZNF549Q6P9A3 640 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 LDB1Q86U70 411 aaPredicted RBP14.98□□□□□ -0.01
SCFD2-201ENST00000388940 HMGCLL1Q8TB92 370 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 PIP4K2CQ8TBX8 421 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 GLT1D1Q96MS3 346 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 TUBGCP5Q96RT8 1024 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 GPR62Q9BZJ7 368 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 YIPF3Q9GZM5 350 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 ALG9Q9H6U8 611 aa14.98□□□□□ -0.01
SCFD2-201ENST00000388940 DNAH12Q6ZR08 3092 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 UBFD1O14562 309 aaKnown RBP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 MUSKO15146 869 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 SMIM24O75264 130 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 SOAT2O75908 522 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 VNN2O95498 520 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 ALDH1A1P00352 501 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 HMBSP08397 361 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 ELNP15502 786 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 PKNOX1P55347 436 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 TIAL1Q01085 375 aaKnown RBP eCLIP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 LRP8Q14114 963 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 UNC50Q53HI1 259 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 GK5Q6ZS86 529 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 CIR1Q86X95 450 aaPredicted RBP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 SLC43A3Q8NBI5 491 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 ICA1LQ8NDH6 482 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 CATSPER1Q8NEC5 780 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 RHEBL1Q8TAI7 183 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 C2orf15Q8WU43 125 aaKnown RBP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 MYEOVQ96EZ4 313 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 TRIB3Q96RU7 358 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 ZIC5Q96T25 663 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 MAGEH1Q9H213 219 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 SLC27A5Q9Y2P5 690 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 DTNAQ9Y4J8 743 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 PCDHGA7Q9Y5G6 932 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 PSMD12O00232 456 aaPredicted RBP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 CCL22O00626 93 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 GPC4O75487 556 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 FGF4P08620 206 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 SERPINF2P08697 491 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 ACADVLP49748 655 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 PLK1P53350 603 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 PSME3P61289 254 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 HERVK_113P63132 956 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 ADGRE1Q14246 886 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 FASTKQ14296 549 aaKnown RBP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 GRM2Q14416 872 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 MGAT5BQ3V5L5 792 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 RNF220Q5VTB9 566 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 LARP4Q71RC2 724 aaKnown RBP eCLIP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 BBS5Q8N3I7 341 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 PNPLA1Q8N8W4 532 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms