RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 DYNC1LI2O43237 492 aaPredicted RBP13.9□□□□□ -0.18
SDC1-202ENST00000381150 NRP2O60462 931 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 TCEA1P23193 301 aaKnown RBP13.9□□□□□ -0.18
SDC1-202ENST00000381150 OXTRP30559 389 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 MAGEA3P43357 314 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 PTPN9P43378 593 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 CDC42EP1Q00587 391 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 INPP5AQ14642 412 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 PCBP1Q15365 356 aaKnown RBP eCLIP13.9□□□□□ -0.183e-7■■■■■ 64.9
SDC1-202ENST00000381150 FAM110CQ1W6H9 321 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 UBXN11Q5T124 520 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 STXBP5Q5T5C0 1151 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 NCBP2-AS2Q69YL0 99 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 CNSTQ6PJW8 725 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 ZDHHC17Q8IUH5 632 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 BEST2Q8NFU1 509 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 ACDQ96AP0 544 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 ZNF670Q9BS34 389 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 MID2Q9UJV3 735 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 PTGDR2Q9Y5Y4 395 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 KPNA4O00629 521 aaPredicted RBP13.9□□□□□ -0.18
SDC1-202ENST00000381150 ALBP02768 609 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 MPOP05164 745 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 NIPAL1Q6NVV3 410 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 ANKRD52Q8NB46 1076 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 MIR1-1HGQ9H1L0 117 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 EXD2Q9NVH0 621 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 GDAP2Q9NXN4 497 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 GIN1Q9NXP7 522 aa13.9□□□□□ -0.18
SDC1-202ENST00000381150 PSMD11O00231 422 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 SDHDO14521 159 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 ANGPT2O15123 496 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 TIMM44O43615 452 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 RSL1D1O76021 490 aaKnown RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 OPRL1P41146 370 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 FPGSQ05932 587 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 SOX4Q06945 474 aaPredicted RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 DGCR6Q14129 220 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 DPYSL2Q16555 572 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 MOGQ16653 247 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 USP41Q3LFD5 358 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 RWDD4Q6NW29 188 aaKnown RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 SLC26A9Q7LBE3 791 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 TMEM126BQ8IUX1 230 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 PSD4Q8NDX1 1056 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 HDAC10Q969S8 669 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 NRBF2Q96F24 287 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 RNF145Q96MT1 663 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 QKIQ96PU8 341 aaKnown RBP eCLIP13.89□□□□□ -0.19
SDC1-202ENST00000381150 IFT80Q9P2H3 777 aaPredicted RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 TRPC5OSA6NMA1 111 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 HAS3O00219 553 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 RABGGTBP53611 331 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 C1QTNF8P60827 252 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 PAGE2BQ5JRK9 111 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 C17orf50Q8WW18 174 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 C1orf50Q9BV19 199 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 RAD21L1Q9H4I0 556 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 LTB4R2Q9NPC1 389 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 FLRT1Q9NZU1 646 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 ZNHIT2Q9UHR6 403 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 UBQLN1Q9UMX0 589 aaKnown RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 HUS1O60921 280 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 BAIAP3O94812 1187 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 MYO1DO94832 1006 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 CYP2C9P11712 490 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 IL7RP16871 459 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 SCNN1AP37088 669 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 SULT1E1P49888 294 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 BCAT1P54687 386 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 PITX1P78337 314 aaPredicted RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 SPANXN3Q5MJ09 141 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 FBXO47Q5MNV8 452 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 MORN1Q5T089 497 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 THOC7Q6I9Y2 204 aaKnown RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 ZYG11AQ6WRX3 759 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 CELF6Q96J87 481 aaKnown RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 MRPL40Q9NQ50 206 aaKnown RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 SUCOQ9UBS9 1254 aaKnown RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 VTI1BQ9UEU0 232 aa13.89□□□□□ -0.19
SDC1-202ENST00000381150 MAGED1Q9Y5V3 778 aaPredicted RBP13.89□□□□□ -0.19
SDC1-202ENST00000381150 SYNCRIPO60506 623 aaKnown RBP13.88□□□□□ -0.19
SDC1-202ENST00000381150 CABYRO75952 493 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 ZNF865P0CJ78 1059 aaPredicted RBP13.88□□□□□ -0.19
SDC1-202ENST00000381150 KCNE1P15382 129 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 SNX17Q15036 470 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 CCDC81Q6ZN84 652 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 CMTR2Q8IYT2 770 aaKnown RBP13.88□□□□□ -0.19
SDC1-202ENST00000381150 DNAJB3Q8WWF6 145 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 TANKQ92844 425 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 MUS81Q96NY9 551 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 NAT9Q9BTE0 207 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 STMN1P16949 149 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 PAX3P23760 479 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 SEPHS1P49903 392 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 MLLT10P55197 1068 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 BST2Q10589 180 aaKnown RBP13.88□□□□□ -0.19
SDC1-202ENST00000381150 MAPRE2Q15555 327 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms