RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 FAM207AQ9NSI2 230 aaPredicted RBP16.06■□□□□ 0.16
VCX3A-201ENST00000381089 SEPT11Q9NVA2 429 aaKnown RBP16.06■□□□□ 0.16
VCX3A-201ENST00000381089 TAB2Q9NYJ8 693 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 FZD10Q9ULW2 581 aa16.06■□□□□ 0.16
VCX3A-201ENST00000381089 RHPN2P1A8MT19 583 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 STMND1H3BQB6 276 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 CCP110O43303 1012 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 BUB1BO60566 1050 aaPredicted RBP16.05■□□□□ 0.16
VCX3A-201ENST00000381089 PRAMEF11O60813 436 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 NFKBIAP25963 317 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 PTP4A2Q12974 167 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 TBR1Q16650 682 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 CLEC16AQ2KHT3 1053 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 LIPIQ6XZB0 460 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 DTX1Q86Y01 620 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 SLITRK4Q8IW52 837 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 CCDC112Q8NEF3 446 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 CNPY3Q9BT09 278 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 GSDMCQ9BYG8 508 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 NUP62CLQ9H1M0 184 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 CLSTN2Q9H4D0 955 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 LRRC19Q9H756 370 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 PDFQ9HBH1 243 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 NLRC4Q9NPP4 1024 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 MRPL40Q9NQ50 206 aaKnown RBP16.05■□□□□ 0.16
VCX3A-201ENST00000381089 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
VCX3A-201ENST00000381089 KCTD5Q9NXV2 234 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 FOXJ2Q9P0K8 574 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 ANKRD36A6QL64 1941 aa16.05■□□□□ 0.16
VCX3A-201ENST00000381089 PRSS38A1L453 326 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 C9orf172C9J069 976 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.04■□□□□ 0.16
VCX3A-201ENST00000381089 J3KR12 359 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 HGSO14964 777 aaPredicted RBP16.04■□□□□ 0.16
VCX3A-201ENST00000381089 SUV39H1O43463 412 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 PRKCGP05129 697 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 ITGB6P18564 788 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 TRIM23P36406 574 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 ETV5P41161 510 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 JAM2P57087 298 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 ILF3Q12906 894 aaKnown RBP eCLIP16.04■□□□□ 0.16
VCX3A-201ENST00000381089 RFTN1Q14699 578 aaPredicted RBP16.04■□□□□ 0.16
VCX3A-201ENST00000381089 ACOX1Q15067 660 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 AMZ1Q400G9 498 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 DCUN1D2Q6PH85 259 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 ZNF574Q6ZN55 896 aaPredicted RBP16.04■□□□□ 0.16
VCX3A-201ENST00000381089 NYAP1Q6ZVC0 841 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 DPPA4Q7L190 304 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 MCEEQ96PE7 176 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 SLC25A18Q9H1K4 315 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 SEMA6CQ9H3T2 930 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 CARS2Q9HA77 564 aaKnown RBP16.04■□□□□ 0.16
VCX3A-201ENST00000381089 SP110Q9HB58 689 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 PHPT1Q9NRX4 125 aaPredicted RBP16.04■□□□□ 0.16
VCX3A-201ENST00000381089 SEPT3Q9UH03 358 aa16.04■□□□□ 0.16
VCX3A-201ENST00000381089 TLN1Q9Y490 2541 aaKnown RBP16.04■□□□□ 0.16
VCX3A-201ENST00000381089 EIF3CLB5ME19 914 aaKnown RBP16.03■□□□□ 0.16
VCX3A-201ENST00000381089 TEX33O43247 280 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 DAPK3O43293 454 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 MYCLP1P12525 358 aaPredicted RBP16.03■□□□□ 0.16
VCX3A-201ENST00000381089 CCNB1P14635 433 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 ALDH4A1P30038 563 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 PAPOLAP51003 745 aaKnown RBP16.03■□□□□ 0.16
VCX3A-201ENST00000381089 RENBPP51606 427 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 NFKB2Q00653 900 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 B4GALNT1Q00973 533 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 NSUN2Q08J23 767 aaKnown RBP eCLIP16.03■□□□□ 0.16
VCX3A-201ENST00000381089 RALGDSQ12967 914 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 NFKBIBQ15653 356 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 AFMIDQ63HM1 303 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 KCTD16Q68DU8 428 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 PNCKQ6P2M8 343 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 ZSWIM9Q86XI8 627 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 TSEN2Q8NCE0 465 aaKnown RBP16.03■□□□□ 0.16
VCX3A-201ENST00000381089 GPBAR1Q8TDU6 330 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 ZDHHC1Q8WTX9 485 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 CELF6Q96J87 481 aaKnown RBP16.03■□□□□ 0.16
VCX3A-201ENST00000381089 PCMTD1Q96MG8 357 aaPredicted RBP16.03■□□□□ 0.16
VCX3A-201ENST00000381089 TAAR9Q96RI9 348 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 PCDHB18PQ96TA0 734 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 EIF3CQ99613 913 aaKnown RBP16.03■□□□□ 0.16
VCX3A-201ENST00000381089 VPS16Q9H269 839 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 ADNPQ9H2P0 1102 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 RDH14Q9HBH5 336 aa16.03■□□□□ 0.16
VCX3A-201ENST00000381089 GEMIN8Q9NWZ8 242 aaKnown RBP16.03■□□□□ 0.16
VCX3A-201ENST00000381089 A0A1W2PQ67 120 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 EEF2KO00418 725 aaKnown RBP16.02■□□□□ 0.16
VCX3A-201ENST00000381089 PTMSP20962 102 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 GPR3P46089 330 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 KLK7P49862 253 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 AP1S1P61966 158 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 TRA2AQ13595 282 aaKnown RBP eCLIP16.02■□□□□ 0.16
VCX3A-201ENST00000381089 C16orf72Q14CZ0 275 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 BORAQ6PGQ7 559 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 MON1BQ7L1V2 547 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 IL22RA1Q8N6P7 574 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 CCL4L1Q8NHW4 92 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 ECHDC3Q96DC8 303 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 NUS1Q96E22 293 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 SLC39A8Q9C0K1 460 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms