RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SEPT3Q9UH03 358 aa17.85■□□□□ 0.45
PDLIM4-202ENST00000379018 PRSS38A1L453 326 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 CCP110O43303 1012 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 B4GAT1O43505 415 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 CYP1A1P04798 512 aaPredicted RBP17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 CHRNB2P17787 502 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 MPSTP25325 297 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 SERPINA4P29622 427 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 YBEYP58557 167 aaPredicted RBP17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 BECN1Q14457 450 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 NKAIN2Q5VXU1 208 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 DENND2CQ68D51 928 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 BORAQ6PGQ7 559 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 PELI3Q8N2H9 469 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 MLKLQ8NB16 471 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 ZDHHC1Q8WTX9 485 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 CENPIQ92674 756 aaPredicted RBP17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 ZNF641Q96N77 438 aaPredicted RBP17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 EPN3Q9H201 632 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 SPATS2LQ9NUQ6 558 aaKnown RBP17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 TAB2Q9NYJ8 693 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 ANKMY1Q9P2S6 941 aa17.84■□□□□ 0.45
PDLIM4-202ENST00000379018 NBASA2RRP1 2371 aa17.83■□□□□ 0.45
PDLIM4-202ENST00000379018 GOLGA6CA6NDK9 693 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 GOLGA6BA6NDN3 693 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 GOLGA6DP0CG33 693 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 LIFP15018 202 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 AK4P27144 223 aaPredicted RBP17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 NSFP46459 744 aaKnown RBP17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 GNPDA1P46926 289 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 KLK7P49862 253 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 POLE2P56282 527 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 TPI1P60174 286 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 WDR59Q6PJI9 974 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 SLC30A9Q6PML9 568 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 LIPIQ6XZB0 460 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 SRLQ86TD4 932 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 ZNF677Q86XU0 584 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 TSEN2Q8NCE0 465 aaKnown RBP17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 ZNF564Q8TBZ8 553 aaPredicted RBP17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 HCAR2Q8TDS4 363 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 PATE1Q8WXA2 126 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 ART4Q93070 314 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 SLC12A9Q9BXP2 914 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 ATP13A3Q9H7F0 1226 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 NLRC4Q9NPP4 1024 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 GPATCH2LQ9NWQ4 482 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 GOLGA6AQ9NYA3 693 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 ADAM22Q9P0K1 906 aa17.83■□□□□ 0.44
PDLIM4-202ENST00000379018 IGHV5-10-1A0A0J9YXX1 117 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 PALMO75781 387 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 ECEL1O95672 775 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 FGF3P11487 239 aaPredicted RBP17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 POLR2FP61218 127 aaKnown RBP17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 BCL2L1Q07817 233 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 KCNAB2Q13303 367 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 AGERQ15109 404 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 IGFBP7Q16270 282 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 NKD1Q969G9 470 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 TAAR9Q96RI9 348 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 TUBGCP5Q96RT8 1024 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 PCDHB18PQ96TA0 734 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 CINPQ9BW66 212 aaPredicted RBP17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 GSDMCQ9BYG8 508 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 PDFQ9HBH1 243 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 ZNF71Q9NQZ8 489 aaPredicted RBP17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 TAAR2Q9P1P5 351 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 FZD10Q9ULW2 581 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 B3GALT1Q9Y5Z6 326 aa17.82■□□□□ 0.44
PDLIM4-202ENST00000379018 TNFRSF10CO14798 259 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 PRAMEF11O60813 436 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 PRKAR1AP10644 381 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 CCNB1P14635 433 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 PAPOLAP51003 745 aaKnown RBP17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 ARSDP51689 593 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 ILF3Q12906 894 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 PTP4A2Q12974 167 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 TSR1Q2NL82 804 aaKnown RBP17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 DPCR1Q3MIW9 517 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 PNCKQ6P2M8 343 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 DNAJC24Q6P3W2 148 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 DPPA4Q7L190 304 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 FAM129CQ86XR2 697 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 NRSN1Q8IZ57 195 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 UMODL1-AS1Q8N2C9 162 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 NUS1Q96E22 293 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 MCEEQ96PE7 176 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 GANQ9H2C0 597 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 ADNPQ9H2P0 1102 aa17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 FAM207AQ9NSI2 230 aaPredicted RBP17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 SAMSN1Q9NSI8 373 aaKnown RBP17.81■□□□□ 0.44
PDLIM4-202ENST00000379018 TTC24A2A3L6 582 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 ANKRD62A6NC57 917 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 ARHGAP42A6NI28 874 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 DFFAO00273 331 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 HGSO14964 777 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 FGF10O15520 208 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 FGF1P05230 155 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 MYCLP1P12525 358 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 GM2AP17900 193 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms