RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CYLDQ9NQC7 956 aa13.66□□□□□ -0.22
GPC6-201ENST00000377047 ATG13O75143 517 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 PRNPP04156 253 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 RPL4P36578 427 aaKnown RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 CYP4F2P78329 520 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 FNBP1LQ5T0N5 605 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 CIR1Q86X95 450 aaPredicted RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 C1orf127Q8N9H9 656 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 TERB1Q8NA31 727 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 BHLHE22Q8NFJ8 381 aaPredicted RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 PCED1BQ96HM7 432 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 CSPG4P5Q96PW8 444 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 ACBD6Q9BR61 282 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 COQ6Q9Y2Z9 468 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 CAPN1P07384 714 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 FGFR3P22607 806 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 NAA20P61599 178 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 FPGSQ05932 587 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 SPDYCQ5MJ68 293 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 DLK2Q6UY11 383 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 OR4K2Q8NGD2 314 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 IRGQQ8WZA9 623 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 SNX15Q9NRS6 342 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 ANAPC2Q9UJX6 822 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 PER2O15055 1255 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 SRSF11Q05519 484 aaKnown RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 TNS4Q8IZW8 715 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 PRELID2Q8N945 189 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 TSEN2Q8NCE0 465 aaKnown RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 DBF4BQ8NFT6 615 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 ASZ1Q8WWH4 475 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 PGM2Q96G03 612 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 AARSD1Q9BTE6 412 aaKnown RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 XPR1Q9UBH6 696 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 CPQQ9Y646 472 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 FAM237BA0A1B0GVD1 139 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 EOMESO95936 686 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 FAM58BPP0C7Q3 252 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 BMP6P22004 513 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 ITPKAP23677 461 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 GSTM5P46439 218 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 LRRC74BQ6ZQY2 392 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 IRF2BP2Q7Z5L9 587 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 C17orf64Q86WR6 236 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 OR4A15Q8NGL6 344 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 DNAJB14Q8TBM8 379 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 CORO2BQ9UQ03 480 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 MFSD11O43934 449 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 RPP40O75818 363 aaKnown RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 RECQL5O94762 991 aaPredicted RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 C8AP07357 584 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 CAP1Q01518 475 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 TRIM16LQ309B1 348 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 EIF3MQ7L2H7 374 aaKnown RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 TAF8Q7Z7C8 310 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 C9orf16Q9BUW7 83 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 CAB39LQ9H9S4 337 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 SGK2Q9HBY8 427 aa13.65□□□□□ -0.22
GPC6-201ENST00000377047 MRPS17Q9Y2R5 130 aaKnown RBP13.65□□□□□ -0.22
GPC6-201ENST00000377047 PIPSLA2A3N6 862 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 SLC38A8A6NNN8 435 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 PTGES3LE9PB15 166 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 TRIM24O15164 1050 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 CLPTM1O96005 669 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 R3HCC1LQ7Z5L2 792 aaKnown RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 GALNT13Q8IUC8 556 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 CACTIN-AS1Q8N1I8 211 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 PIWIL2Q8TC59 973 aaKnown RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 C11orf84Q9BUA3 381 aaPredicted RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 ACE2Q9BYF1 805 aaPredicted RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 GTF2IRD1Q9UHL9 959 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 VWA7Q9Y334 891 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 SNRPB2P08579 225 aaKnown RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 RHOQP17081 205 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 RABGGTBP53611 331 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 CYP4F8P98187 520 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 UBXN2BQ14CS0 331 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 CHSY3Q70JA7 882 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 ADHFE1Q8IWW8 467 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 C4orf32Q8N8J7 132 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 KREMEN2Q8NCW0 462 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 DQX1Q8TE96 717 aaKnown RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 FEM1CQ96JP0 617 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 PCDHB18PQ96TA0 734 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 LEF1Q9UJU2 399 aaPredicted RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 MRPS33Q9Y291 106 aaKnown RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 HNRNPLP14866 589 aaKnown RBP eCLIP13.64□□□□□ -0.235e-7■■■■□ 19.4
GPC6-201ENST00000377047 TSHRP16473 764 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 SYN1P17600 705 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 IDSP22304 550 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 ATP12AP54707 1039 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 CAPN13Q6MZZ7 669 aaPredicted RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 NRSN1Q8IZ57 195 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 ART4Q93070 314 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 DHX33Q9H6R0 707 aaKnown RBP13.64□□□□□ -0.23
GPC6-201ENST00000377047 TPRKBQ9Y3C4 175 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 H3BM21 787 aa13.64□□□□□ -0.23
GPC6-201ENST00000377047 CDK14O94921 469 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms