RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 CCDC197Q8NCU1 140 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 PIP4K2CQ8TBX8 421 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 CCDC124Q96CT7 223 aaKnown RBP13.58□□□□□ -0.24
DDR1-225ENST00000376568 MAGEB10Q96LZ2 347 aaPredicted RBP13.58□□□□□ -0.24
DDR1-225ENST00000376568 SRPK1Q96SB4 655 aaKnown RBP13.58□□□□□ -0.24
DDR1-225ENST00000376568 FRMD8P1Q9BZ68 369 aaPredicted RBP13.58□□□□□ -0.24
DDR1-225ENST00000376568 TMEM98Q9Y2Y6 226 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 ZSWIM8A7E2V4 1837 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 H3BNC9 293 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 SUN1O94901 812 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 POU4F1Q01851 419 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 PPIDQ08752 370 aaKnown RBP13.58□□□□□ -0.24
DDR1-225ENST00000376568 NIPAL4Q0D2K0 466 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 SERINC3Q13530 473 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 GALNTL6Q49A17 601 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 TSPAN33Q86UF1 283 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 IFNEQ86WN2 208 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 WDR75Q8IWA0 830 aaKnown RBP13.58□□□□□ -0.24
DDR1-225ENST00000376568 OR10G6Q8NH81 332 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 SLC7A5P2Q9GIP4 190 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 ATG10Q9H0Y0 220 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 SUV39H2Q9H5I1 410 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 SLCO1B3Q9NPD5 702 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 CASS4Q9NQ75 786 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 RAB21Q9UL25 225 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 USP3Q9Y6I4 520 aa13.58□□□□□ -0.24
DDR1-225ENST00000376568 ANTXRLA6NF34 631 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 I6L893 689 aaPredicted RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 POP4O95707 220 aaKnown RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 GOT2P00505 430 aaKnown RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 HMOX2P30519 316 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 HIBCHQ6NVY1 386 aaPredicted RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 HID1Q8IV36 788 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 RNF217Q8TC41 542 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 TACO1Q9BSH4 297 aaKnown RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 ECT2Q9H8V3 914 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 SEMA4BQ9NPR2 832 aaPredicted RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 ZFHX2Q9C0A1 2572 aaPredicted RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 ILVBLA1L0T0 632 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 CCDC162PA2VCL2 907 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 NEMP2A6NFY4 417 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 CES2O00748 559 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 HAUS5O94927 633 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 STATHP02808 62 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 F11P03951 625 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 DLDP09622 509 aaKnown RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 HNRNPLP14866 589 aaKnown RBP eCLIP13.57□□□□□ -0.242e-10■■■□□ 15.1
DDR1-225ENST00000376568 EPB42P16452 691 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 ZNF7P17097 686 aaPredicted RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 MAPKAPK2P49137 400 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 KPNA2P52292 529 aaKnown RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 TTMPQ5BVD1 217 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 PTCRAQ6ISU1 281 aaPredicted RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 RPS27LQ71UM5 84 aaKnown RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 LRRC34Q8IZ02 419 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 FRMD1Q8N878 549 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 TRIM55Q9BYV6 548 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 USP29Q9HBJ7 922 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 SLC17A7Q9P2U7 560 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 CDH7Q9ULB5 785 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 PSAT1Q9Y617 370 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 SLC9A4Q6AI14 798 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 BEND7Q8N7W2 519 aaPredicted RBP13.57□□□□□ -0.24
DDR1-225ENST00000376568 P2RY13Q9BPV8 354 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 TSSK1BQ9BXA7 367 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 KLHL25Q9H0H3 589 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 POMKQ9H5K3 350 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 KCND1Q9NSA2 647 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 GRID1Q9ULK0 1009 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 CYP8B1Q9UNU6 501 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 ZNF510Q9Y2H8 683 aa13.57□□□□□ -0.24
DDR1-225ENST00000376568 C5orf60A6NFR6 353 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 DCLK1O15075 740 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 RASGRP1O95267 797 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 EIF2S1P05198 315 aaKnown RBP13.56□□□□□ -0.24
DDR1-225ENST00000376568 HALP42357 657 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 CLCN4P51793 760 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 NDST2P52849 883 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 GRM3Q14832 879 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 COPS8Q99627 209 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 NAT9Q9BTE0 207 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 RCOR3Q9P2K3 495 aaPredicted RBP13.56□□□□□ -0.24
DDR1-225ENST00000376568 CD207Q9UJ71 328 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 GMNCA6NCL1 334 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 MEI4A8MW99 385 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 AURKAO14965 403 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 MAFKO60675 156 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 TFEBP19484 476 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 MDH1P40925 334 aaKnown RBP13.56□□□□□ -0.24
DDR1-225ENST00000376568 AIF1P55008 147 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 DRG2P55039 364 aaKnown RBP13.56□□□□□ -0.24
DDR1-225ENST00000376568 CARD16Q5EG05 197 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 C6orf10Q5SRN2 563 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 ATG16L1Q676U5 607 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 C22orf39Q6P5X5 142 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 PKN3Q6P5Z2 889 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 PIM3Q86V86 326 aa13.56□□□□□ -0.24
DDR1-225ENST00000376568 E2F7Q96AV8 911 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms