RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SH2D4BQ5SQS7 431 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 KLC3Q6P597 504 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 ANKS3Q6ZW76 656 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 CRIPAKQ8N1N5 446 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 OMDQ99983 421 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 DRC3Q9H069 523 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 RBM38Q9H0Z9 239 aaKnown RBP14.05□□□□□ -0.16
MSH5-202ENST00000375740 EPB41L1Q9H4G0 881 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 CIDEBQ9UHD4 219 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 LZTS1Q9Y250 596 aa14.05□□□□□ -0.16
MSH5-202ENST00000375740 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.04□□□□□ -0.16
MSH5-202ENST00000375740 BOLA2-SMG1P6H3BVE0 249 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 DLX3O60479 287 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 CLPTM1O96005 669 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 MYL4P12829 197 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 MPSTP25325 297 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 DNAJB1P25685 340 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 VARSP26640 1264 aaKnown RBP14.04□□□□□ -0.16
MSH5-202ENST00000375740 SMARCB1Q12824 385 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 SFSWAPQ12872 951 aaKnown RBP14.04□□□□□ -0.16
MSH5-202ENST00000375740 GRAMD1BQ3KR37 738 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 PARP15Q460N3 678 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 RBM20Q5T481 1227 aaKnown RBP14.04□□□□□ -0.16
MSH5-202ENST00000375740 LGI2Q8N0V4 545 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 TADA1Q96BN2 335 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 CATSPER2Q96P56 530 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 XPR1Q9UBH6 696 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 SLC5A2P31639 672 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 RPL5P46777 297 aaKnown RBP14.04□□□□□ -0.16
MSH5-202ENST00000375740 SLC12A2P55011 1212 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 YBEYP58557 167 aaPredicted RBP14.04□□□□□ -0.16
MSH5-202ENST00000375740 POU4F1Q01851 419 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 TNK2Q07912 1038 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 DNAL1Q4LDG9 190 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 ARL13AQ5H913 290 aaPredicted RBP14.04□□□□□ -0.16
MSH5-202ENST00000375740 TRIM67Q6ZTA4 783 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 ADGRG6Q86SQ4 1221 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 SLAIN1Q8ND83 568 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 OR13J1Q8NGT2 312 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 SCLYQ96I15 445 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 SEMA3CQ99985 751 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 TMEM175Q9BSA9 504 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 C1orf21Q9H246 121 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 CYP4F11Q9HBI6 524 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 PACSIN3Q9UKS6 424 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 RAP2CQ9Y3L5 183 aa14.04□□□□□ -0.16
MSH5-202ENST00000375740 A0A1B0GTW7 788 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 CCL22O00626 93 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 PIGNO95427 931 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 RAG1P15918 1043 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 RPL17P18621 184 aaKnown RBP14.03□□□□□ -0.16
MSH5-202ENST00000375740 PMLP29590 882 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 PRKAA2P54646 552 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 TCHHL1Q5QJ38 904 aaPredicted RBP14.03□□□□□ -0.16
MSH5-202ENST00000375740 KLHL35Q6PF15 583 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 KIAA0408Q6ZU52 694 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 PTAR1Q7Z6K3 402 aaPredicted RBP14.03□□□□□ -0.16
MSH5-202ENST00000375740 FBXO22Q8NEZ5 403 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 C2orf15Q8WU43 125 aaKnown RBP14.03□□□□□ -0.16
MSH5-202ENST00000375740 HEXDCQ8WVB3 486 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 APPL1Q9UKG1 709 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 KCTD3Q9Y597 815 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 A0A087X1B8 175 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 LOC285095A0A1B0GVY8 99 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 MROH6A6NGR9 719 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 H3BSA7 217 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 MUSKO15146 869 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 PRAMEF11O60813 436 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 PAPSS2O95340 614 aaPredicted RBP14.03□□□□□ -0.16
MSH5-202ENST00000375740 GNRH1P01148 92 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 ATXN1LP0C7T5 689 aaKnown RBP14.03□□□□□ -0.16
MSH5-202ENST00000375740 SLC6A4P31645 630 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 LEPRP48357 1165 aaKnown RBP14.03□□□□□ -0.16
MSH5-202ENST00000375740 MAPKAPK2P49137 400 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 RPL14P50914 215 aaKnown RBP14.03□□□□□ -0.16
MSH5-202ENST00000375740 KPNA1P52294 538 aaPredicted RBP14.03□□□□□ -0.16
MSH5-202ENST00000375740 SULT2A1Q06520 285 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 MTA1Q13330 715 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 AAGABQ6PD74 315 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 IYDQ6PHW0 289 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 PHTF2Q8N3S3 785 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 OR6P1Q8NGX9 317 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 CALML6Q8TD86 181 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 HDAC10Q969S8 669 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 SGF29Q96ES7 293 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 OLFM1Q99784 485 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 LIN28AQ9H9Z2 209 aaKnown RBP14.03□□□□□ -0.16
MSH5-202ENST00000375740 ZNF711Q9Y462 761 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 BPTFQ12830 3046 aa14.03□□□□□ -0.16
MSH5-202ENST00000375740 TMEM221A6NGB7 291 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 E9PBE3 544 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 F5H5T6 163 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 MATN2O00339 956 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 HOXA2O43364 376 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 KLHL41O60662 606 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 ARSDP51689 593 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 ZNF554Q86TJ5 538 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 LDB1Q86U70 411 aaPredicted RBP14.02□□□□□ -0.16
MSH5-202ENST00000375740 HPS6Q86YV9 775 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 LSMEM2Q8N112 164 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms