RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 EPCAMP16422 314 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 NOS3P29474 1203 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 HUNKP57058 714 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 BAIAP2L2Q6UXY1 529 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 KBTBD6Q86V97 674 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 ZNF781Q8N8C0 355 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 NIPAL2Q9H841 368 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 TREM1Q9NP99 234 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 CHST12Q9NRB3 414 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 KCNH7Q9NS40 1196 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 ARL8BQ9NVJ2 186 aa6.64□□□□□ -1.35
UBR4-204ENST00000375254 EFCAB7A8K855 629 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ADAMDEC1O15204 470 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 GATBO75879 557 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 CYP11B1P15538 503 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ENTPD1P49961 510 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 GEMP55040 296 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 C15orf52Q6ZUT6 534 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 ATP6V1C2Q8NEY4 427 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 CHPT1Q8WUD6 406 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 HSPA12BQ96MM6 686 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 SEZ6LQ9BYH1 1024 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 DCSTAMPQ9H295 470 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 APOC3P02656 99 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 CUL2Q13617 745 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 PTRHD1Q6GMV3 140 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 SZRD1Q7Z422 152 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ZSCAN1Q8NBB4 408 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 RPRD1AQ96P16 312 aaPredicted RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 SLC29A1Q99808 456 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 DHX35Q9H5Z1 703 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 HEBP1Q9NRV9 189 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ZNF510Q9Y2H8 683 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 PLEKHG1Q9ULL1 1385 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 PDGFAP04085 211 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 RFC4P35249 363 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 NDST1P52848 882 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 MED22Q15528 200 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ANGEL2Q5VTE6 544 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 PNCKQ6P2M8 343 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ATP6V0D2Q8N8Y2 350 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 FAM84AQ96KN4 292 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 HMX3A6NHT5 357 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 SLC28A1O00337 649 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 UBXN7O94888 489 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 MYL3P08590 195 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 CD36P16671 472 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 HK3P52790 923 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 LRRN4CLQ8ND94 238 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 DNTTP04053 509 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 MTHFRP42898 656 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 KCNJ8Q15842 424 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 RFTN2Q52LD8 501 aaPredicted RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 TRIM40Q6P9F5 258 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ISOC1Q96CN7 298 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 TP63Q9H3D4 680 aaPredicted RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 PCDH10Q9P2E7 1040 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 DISP3Q9P2K9 1392 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 BPGMP07738 259 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 GRK4P32298 578 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 LSM3P62310 102 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 SEC23AQ15436 765 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 PCK2Q16822 640 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 SLC39A13Q96H72 371 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 CNTNAP3BQ96NU0 1288 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 COL21A1Q96P44 957 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 SIAEQ9HAT2 523 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 CYP3A43Q9HB55 503 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 MYNNQ9NPC7 610 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 PRH1P02810 166 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ZSWIM2Q8NEG5 633 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 REXO5Q96IC2 774 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 LPIN3Q9BQK8 851 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ROGDIQ9GZN7 287 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ACOX1Q15067 660 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 SLC9A9Q8IVB4 645 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 GPKOWQ92917 476 aaPredicted RBP eCLIP6.63□□□□□ -1.355e-7■■■□□ 15
UBR4-204ENST00000375254 PNMA8BQ9ULN7 279 aaPredicted RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 SOBPA7XYQ1 873 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 PAK4O96013 591 aaPredicted RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 TFRCP02786 760 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 CKBP12277 381 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 DLGAP5Q15398 846 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 SLFN13Q68D06 897 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ADNP2Q6IQ32 1131 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 FSTL5Q8N475 847 aaPredicted RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 TSPEARQ8WU66 669 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 CD101Q93033 1021 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 RADILQ96JH8 1075 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 CCDC106Q9BWC9 280 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 SLC6A16Q9GZN6 736 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 SARS2Q9NP81 518 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 XPNPEP1Q9NQW7 623 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 HCN2Q9UL51 889 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ZFYVE9O95405 1425 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ABCB7O75027 752 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 IGFBP5P24593 272 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ANXA8L1Q5VT79 327 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 MCMBPQ9BTE3 642 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 TRPS1Q9UHF7 1281 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms